Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC9.01□□□□□ -0.97
KRTAP4-3Q9BYR4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
KRTAP4-3Q9BYR4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
KRTAP4-3Q9BYR4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
KRTAP4-3Q9BYR4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
KRTAP4-3Q9BYR4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 AC108673.1-201ENST00000510422 1159 ntBASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
KRTAP4-3Q9BYR4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP4-3Q9BYR4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
KRTAP4-3Q9BYR4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP4-3Q9BYR4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC8.99□□□□□ -0.97
KRTAP4-3Q9BYR4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP4-3Q9BYR4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP4-3Q9BYR4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
KRTAP4-3Q9BYR4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP4-3Q9BYR4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP4-3Q9BYR4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC8.98□□□□□ -0.97
KRTAP4-3Q9BYR4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
KRTAP4-3Q9BYR4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP4-3Q9BYR4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP4-3Q9BYR4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP4-3Q9BYR4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP4-3Q9BYR4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP4-3Q9BYR4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP4-3Q9BYR4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP4-3Q9BYR4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP4-3Q9BYR4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
KRTAP4-3Q9BYR4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP4-3Q9BYR4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC8.96□□□□□ -0.98
KRTAP4-3Q9BYR4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC8.96□□□□□ -0.98
KRTAP4-3Q9BYR4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
KRTAP4-3Q9BYR4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
KRTAP4-3Q9BYR4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP4-3Q9BYR4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP4-3Q9BYR4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
KRTAP4-3Q9BYR4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 AC016575.1-201ENST00000607026 382 ntBASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 AC010864.1-201ENST00000609407 1511 ntBASIC8.95□□□□□ -0.98
KRTAP4-3Q9BYR4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP4-3Q9BYR4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC8.94□□□□□ -0.98
KRTAP4-3Q9BYR4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC8.94□□□□□ -0.98
KRTAP4-3Q9BYR4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC8.94□□□□□ -0.98
KRTAP4-3Q9BYR4 CR559946.2-201ENST00000623684 991 ntBASIC8.94□□□□□ -0.98
KRTAP4-3Q9BYR4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP4-3Q9BYR4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
KRTAP4-3Q9BYR4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC8.93□□□□□ -0.98
KRTAP4-3Q9BYR4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC8.93□□□□□ -0.98
KRTAP4-3Q9BYR4 DUX4L11-201ENST00000611504 1267 ntBASIC8.93□□□□□ -0.98
KRTAP4-3Q9BYR4 DUX4L12-201ENST00000614593 1267 ntBASIC8.93□□□□□ -0.98
KRTAP4-3Q9BYR4 DUX4L14-201ENST00000621227 1267 ntBASIC8.93□□□□□ -0.98
KRTAP4-3Q9BYR4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
KRTAP4-3Q9BYR4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC8.93□□□□□ -0.98
KRTAP4-3Q9BYR4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC8.92□□□□□ -0.98
KRTAP4-3Q9BYR4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
KRTAP4-3Q9BYR4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-3Q9BYR4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-3Q9BYR4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC8.92□□□□□ -0.98
KRTAP4-3Q9BYR4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-3Q9BYR4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
KRTAP4-3Q9BYR4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 MIR3648-2-201ENST00000581792 180 ntBASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 MIR3648-1-201ENST00000615959 180 ntBASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 AL135925.1-201ENST00000605920 1701 ntBASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
KRTAP4-3Q9BYR4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
KRTAP4-3Q9BYR4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
KRTAP4-3Q9BYR4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC8.9□□□□□ -0.98
KRTAP4-3Q9BYR4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC8.9□□□□□ -0.98
KRTAP4-3Q9BYR4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
KRTAP4-3Q9BYR4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
KRTAP4-3Q9BYR4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms