Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV9Q99603 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TRGV9Q99603 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRGV9Q99603 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRGV9Q99603 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV9Q99603 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV9Q99603 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV9Q99603 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
TRGV9Q99603 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV9Q99603 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRGV9Q99603 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRGV9Q99603 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRGV9Q99603 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.44■□□□□ 0.86
TRGV9Q99603 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV9Q99603 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV9Q99603 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.43■□□□□ 0.86
TRGV9Q99603 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRGV9Q99603 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRGV9Q99603 AC010864.1-201ENST00000609407 1511 ntBASIC20.43■□□□□ 0.86
TRGV9Q99603 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.42■□□□□ 0.86
TRGV9Q99603 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRGV9Q99603 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV9Q99603 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRGV9Q99603 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
TRGV9Q99603 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.39■□□□□ 0.85
TRGV9Q99603 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV9Q99603 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRGV9Q99603 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TRGV9Q99603 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV9Q99603 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRGV9Q99603 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRGV9Q99603 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.36■□□□□ 0.85
TRGV9Q99603 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
TRGV9Q99603 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.36■□□□□ 0.85
TRGV9Q99603 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.36■□□□□ 0.85
TRGV9Q99603 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV9Q99603 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRGV9Q99603 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV9Q99603 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV9Q99603 DRD5P2-201ENST00000421395 2012 ntBASIC20.35■□□□□ 0.85
TRGV9Q99603 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TRGV9Q99603 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRGV9Q99603 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV9Q99603 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV9Q99603 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV9Q99603 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.34■□□□□ 0.85
TRGV9Q99603 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRGV9Q99603 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRGV9Q99603 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TRGV9Q99603 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.33■□□□□ 0.85
TRGV9Q99603 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
TRGV9Q99603 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRGV9Q99603 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
TRGV9Q99603 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TRGV9Q99603 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.32■□□□□ 0.84
TRGV9Q99603 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV9Q99603 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV9Q99603 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV9Q99603 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.31■□□□□ 0.84
TRGV9Q99603 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV9Q99603 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV9Q99603 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV9Q99603 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV9Q99603 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.29■□□□□ 0.84
TRGV9Q99603 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV9Q99603 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV9Q99603 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV9Q99603 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV9Q99603 RARRES2P7-201ENST00000567349 469 ntBASIC20.28■□□□□ 0.84
TRGV9Q99603 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV9Q99603 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV9Q99603 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRGV9Q99603 SETD8P1-201ENST00000623146 1180 ntBASIC20.26■□□□□ 0.83
TRGV9Q99603 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV9Q99603 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.26■□□□□ 0.83
TRGV9Q99603 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRGV9Q99603 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV9Q99603 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV9Q99603 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.24■□□□□ 0.83
TRGV9Q99603 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.24■□□□□ 0.83
TRGV9Q99603 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV9Q99603 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV9Q99603 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.23■□□□□ 0.83
TRGV9Q99603 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV9Q99603 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
TRGV9Q99603 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV9Q99603 AP004833.2-201ENST00000532228 1454 ntBASIC20.23■□□□□ 0.83
TRGV9Q99603 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.22■□□□□ 0.83
TRGV9Q99603 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV9Q99603 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV9Q99603 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV9Q99603 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV9Q99603 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRGV9Q99603 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.21■□□□□ 0.83
TRGV9Q99603 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV9Q99603 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV9Q99603 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV9Q99603 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV9Q99603 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV9Q99603 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms