Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
DUX3Q96PT4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
DUX3Q96PT4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.39■□□□□ 0.85
DUX3Q96PT4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DUX3Q96PT4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.39■□□□□ 0.85
DUX3Q96PT4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DUX3Q96PT4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.38■□□□□ 0.85
DUX3Q96PT4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DUX3Q96PT4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DUX3Q96PT4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DUX3Q96PT4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DUX3Q96PT4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DUX3Q96PT4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DUX3Q96PT4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.36■□□□□ 0.85
DUX3Q96PT4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.36■□□□□ 0.85
DUX3Q96PT4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
DUX3Q96PT4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DUX3Q96PT4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DUX3Q96PT4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
DUX3Q96PT4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
DUX3Q96PT4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DUX3Q96PT4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
DUX3Q96PT4 HLA-V-202ENST00000446817 847 ntBASIC20.34■□□□□ 0.85
DUX3Q96PT4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DUX3Q96PT4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.34■□□□□ 0.85
DUX3Q96PT4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
DUX3Q96PT4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
DUX3Q96PT4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.33■□□□□ 0.85
DUX3Q96PT4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DUX3Q96PT4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUX3Q96PT4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DUX3Q96PT4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DUX3Q96PT4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DUX3Q96PT4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DUX3Q96PT4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DUX3Q96PT4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DUX3Q96PT4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DUX3Q96PT4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DUX3Q96PT4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DUX3Q96PT4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DUX3Q96PT4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
DUX3Q96PT4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX3Q96PT4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX3Q96PT4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DUX3Q96PT4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUX3Q96PT4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DUX3Q96PT4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DUX3Q96PT4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.26■□□□□ 0.83
DUX3Q96PT4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
DUX3Q96PT4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DUX3Q96PT4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.25■□□□□ 0.83
DUX3Q96PT4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.25■□□□□ 0.83
DUX3Q96PT4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.25■□□□□ 0.83
DUX3Q96PT4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DUX3Q96PT4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DUX3Q96PT4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
DUX3Q96PT4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DUX3Q96PT4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DUX3Q96PT4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
DUX3Q96PT4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DUX3Q96PT4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DUX3Q96PT4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DUX3Q96PT4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.22■□□□□ 0.83
DUX3Q96PT4 AC010864.1-201ENST00000609407 1511 ntBASIC20.22■□□□□ 0.83
DUX3Q96PT4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.21■□□□□ 0.83
DUX3Q96PT4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DUX3Q96PT4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
DUX3Q96PT4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.21■□□□□ 0.83
DUX3Q96PT4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.21■□□□□ 0.83
DUX3Q96PT4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DUX3Q96PT4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DUX3Q96PT4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DUX3Q96PT4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DUX3Q96PT4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DUX3Q96PT4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.18■□□□□ 0.82
DUX3Q96PT4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.18■□□□□ 0.82
DUX3Q96PT4 DUX4L11-201ENST00000611504 1267 ntBASIC20.17■□□□□ 0.82
DUX3Q96PT4 DUX4L12-201ENST00000614593 1267 ntBASIC20.17■□□□□ 0.82
DUX3Q96PT4 DUX4L14-201ENST00000621227 1267 ntBASIC20.17■□□□□ 0.82
DUX3Q96PT4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DUX3Q96PT4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DUX3Q96PT4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.15■□□□□ 0.82
DUX3Q96PT4 AC016575.1-201ENST00000607026 382 ntBASIC20.15■□□□□ 0.82
DUX3Q96PT4 LINC01971-201ENST00000617888 1048 ntBASIC20.15■□□□□ 0.82
DUX3Q96PT4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DUX3Q96PT4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUX3Q96PT4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.13■□□□□ 0.81
DUX3Q96PT4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.13■□□□□ 0.81
DUX3Q96PT4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DUX3Q96PT4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.12■□□□□ 0.81
DUX3Q96PT4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX3Q96PT4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
DUX3Q96PT4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.11■□□□□ 0.81
DUX3Q96PT4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.11■□□□□ 0.81
DUX3Q96PT4 MIR3648-2-201ENST00000581792 180 ntBASIC20.11■□□□□ 0.81
DUX3Q96PT4 MIR3648-1-201ENST00000615959 180 ntBASIC20.11■□□□□ 0.81
DUX3Q96PT4 CR559946.2-201ENST00000623684 991 ntBASIC20.11■□□□□ 0.81
DUX3Q96PT4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DUX3Q96PT4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DUX3Q96PT4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms