Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RITA1Q96K30 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RITA1Q96K30 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RITA1Q96K30 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RITA1Q96K30 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.17■□□□□ 0.98
RITA1Q96K30 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.17■□□□□ 0.98
RITA1Q96K30 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RITA1Q96K30 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.16■□□□□ 0.98
RITA1Q96K30 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RITA1Q96K30 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RITA1Q96K30 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.15■□□□□ 0.98
RITA1Q96K30 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RITA1Q96K30 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RITA1Q96K30 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RITA1Q96K30 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.14■□□□□ 0.97
RITA1Q96K30 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RITA1Q96K30 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RITA1Q96K30 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RITA1Q96K30 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RITA1Q96K30 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RITA1Q96K30 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RITA1Q96K30 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RITA1Q96K30 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RITA1Q96K30 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RITA1Q96K30 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.12■□□□□ 0.97
RITA1Q96K30 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.12■□□□□ 0.97
RITA1Q96K30 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RITA1Q96K30 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RITA1Q96K30 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RITA1Q96K30 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RITA1Q96K30 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RITA1Q96K30 AC005559.1-201ENST00000589661 871 ntBASIC21.09■□□□□ 0.97
RITA1Q96K30 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.09■□□□□ 0.97
RITA1Q96K30 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RITA1Q96K30 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RITA1Q96K30 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
RITA1Q96K30 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RITA1Q96K30 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RITA1Q96K30 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RITA1Q96K30 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RITA1Q96K30 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.07■□□□□ 0.96
RITA1Q96K30 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RITA1Q96K30 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RITA1Q96K30 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RITA1Q96K30 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.07■□□□□ 0.96
RITA1Q96K30 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RITA1Q96K30 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RITA1Q96K30 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RITA1Q96K30 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RITA1Q96K30 DUX4L28-201ENST00000623687 678 ntBASIC21.05■□□□□ 0.96
RITA1Q96K30 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RITA1Q96K30 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.04■□□□□ 0.96
RITA1Q96K30 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RITA1Q96K30 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RITA1Q96K30 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RITA1Q96K30 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RITA1Q96K30 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.03■□□□□ 0.96
RITA1Q96K30 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.02■□□□□ 0.96
RITA1Q96K30 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.02■□□□□ 0.96
RITA1Q96K30 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RITA1Q96K30 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.02■□□□□ 0.96
RITA1Q96K30 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RITA1Q96K30 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RITA1Q96K30 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RITA1Q96K30 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21■□□□□ 0.95
RITA1Q96K30 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21■□□□□ 0.95
RITA1Q96K30 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21■□□□□ 0.95
RITA1Q96K30 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RITA1Q96K30 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RITA1Q96K30 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RITA1Q96K30 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RITA1Q96K30 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RITA1Q96K30 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RITA1Q96K30 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RITA1Q96K30 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.99■□□□□ 0.95
RITA1Q96K30 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RITA1Q96K30 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.98■□□□□ 0.95
RITA1Q96K30 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RITA1Q96K30 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RITA1Q96K30 AL139393.2-201ENST00000608721 2025 ntBASIC20.97■□□□□ 0.95
RITA1Q96K30 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RITA1Q96K30 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.97■□□□□ 0.95
RITA1Q96K30 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
RITA1Q96K30 MIR3665-201ENST00000578708 105 ntBASIC20.97■□□□□ 0.95
RITA1Q96K30 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.97■□□□□ 0.95
RITA1Q96K30 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RITA1Q96K30 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
RITA1Q96K30 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RITA1Q96K30 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RITA1Q96K30 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RITA1Q96K30 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.95■□□□□ 0.94
RITA1Q96K30 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.95■□□□□ 0.94
RITA1Q96K30 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RITA1Q96K30 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.95■□□□□ 0.94
RITA1Q96K30 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.95■□□□□ 0.94
RITA1Q96K30 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RITA1Q96K30 AP006261.1-201ENST00000584783 668 ntBASIC20.95■□□□□ 0.94
RITA1Q96K30 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RITA1Q96K30 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RITA1Q96K30 AL162393.1-201ENST00000437852 946 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms