Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.7■■■□□ 2.67
CDCA5Q96FF9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDCA5Q96FF9 RARRES2P2-201ENST00000394842 485 ntBASIC31.68■■■□□ 2.66
CDCA5Q96FF9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.68■■■□□ 2.66
CDCA5Q96FF9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDCA5Q96FF9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
CDCA5Q96FF9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.67■■■□□ 2.66
CDCA5Q96FF9 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.66■■■□□ 2.66
CDCA5Q96FF9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.63■■■□□ 2.65
CDCA5Q96FF9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDCA5Q96FF9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA5Q96FF9 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.61■■■□□ 2.65
CDCA5Q96FF9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDCA5Q96FF9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDCA5Q96FF9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CDCA5Q96FF9 ABHD17AP5-201ENST00000580133 923 ntBASIC31.6■■■□□ 2.65
CDCA5Q96FF9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
CDCA5Q96FF9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CDCA5Q96FF9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.58■■■□□ 2.65
CDCA5Q96FF9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDCA5Q96FF9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CDCA5Q96FF9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
CDCA5Q96FF9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CDCA5Q96FF9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
CDCA5Q96FF9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CDCA5Q96FF9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CDCA5Q96FF9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CDCA5Q96FF9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.53■■■□□ 2.64
CDCA5Q96FF9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDCA5Q96FF9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
CDCA5Q96FF9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CDCA5Q96FF9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDCA5Q96FF9 GPX1-201ENST00000419349 1106 ntBASIC31.52■■■□□ 2.64
CDCA5Q96FF9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.52■■■□□ 2.64
CDCA5Q96FF9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CDCA5Q96FF9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.51■■■□□ 2.63
CDCA5Q96FF9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.5■■■□□ 2.63
CDCA5Q96FF9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
CDCA5Q96FF9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDCA5Q96FF9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.47■■■□□ 2.63
CDCA5Q96FF9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.47■■■□□ 2.63
CDCA5Q96FF9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDCA5Q96FF9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CDCA5Q96FF9 RNF126P1-201ENST00000567452 1320 ntBASIC31.45■■■□□ 2.62
CDCA5Q96FF9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.44■■■□□ 2.62
CDCA5Q96FF9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDCA5Q96FF9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.43■■■□□ 2.62
CDCA5Q96FF9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.43■■■□□ 2.62
CDCA5Q96FF9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA5Q96FF9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA5Q96FF9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.42■■■□□ 2.62
CDCA5Q96FF9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA5Q96FF9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA5Q96FF9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CDCA5Q96FF9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.4■■■□□ 2.62
CDCA5Q96FF9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
CDCA5Q96FF9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDCA5Q96FF9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.39■■■□□ 2.62
CDCA5Q96FF9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.38■■■□□ 2.61
CDCA5Q96FF9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDCA5Q96FF9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CDCA5Q96FF9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.36■■■□□ 2.61
CDCA5Q96FF9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CDCA5Q96FF9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CDCA5Q96FF9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
CDCA5Q96FF9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.33■■■□□ 2.61
CDCA5Q96FF9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.33■■■□□ 2.61
CDCA5Q96FF9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
CDCA5Q96FF9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
CDCA5Q96FF9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
CDCA5Q96FF9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.32■■■□□ 2.6
CDCA5Q96FF9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CDCA5Q96FF9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.31■■■□□ 2.6
CDCA5Q96FF9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
CDCA5Q96FF9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
CDCA5Q96FF9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
CDCA5Q96FF9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CDCA5Q96FF9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CDCA5Q96FF9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDCA5Q96FF9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.28■■■□□ 2.6
CDCA5Q96FF9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
CDCA5Q96FF9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
CDCA5Q96FF9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CDCA5Q96FF9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDCA5Q96FF9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.24■■■□□ 2.59
CDCA5Q96FF9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.23■■■□□ 2.59
CDCA5Q96FF9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDCA5Q96FF9 NTF6A-201ENST00000591175 560 ntBASIC31.23■■■□□ 2.59
CDCA5Q96FF9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.22■■■□□ 2.59
CDCA5Q96FF9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.22■■■□□ 2.59
CDCA5Q96FF9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms