Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 DUX4L11-201ENST00000611504 1267 ntBASIC41.06■■■■■ 4.16
CCNB3Q8WWL7 DUX4L12-201ENST00000614593 1267 ntBASIC41.06■■■■■ 4.16
CCNB3Q8WWL7 DUX4L14-201ENST00000621227 1267 ntBASIC41.06■■■■■ 4.16
CCNB3Q8WWL7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC41.06■■■■■ 4.16
CCNB3Q8WWL7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.16
CCNB3Q8WWL7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC41.05■■■■■ 4.16
CCNB3Q8WWL7 CR559946.2-201ENST00000623684 991 ntBASIC41.05■■■■■ 4.16
CCNB3Q8WWL7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC41.05■■■■■ 4.16
CCNB3Q8WWL7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC41.04■■■■■ 4.16
CCNB3Q8WWL7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC41.03■■■■■ 4.16
CCNB3Q8WWL7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC41.02■■■■■ 4.16
CCNB3Q8WWL7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC41■■■■■ 4.15
CCNB3Q8WWL7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC41■■■■■ 4.15
CCNB3Q8WWL7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC40.99■■■■■ 4.15
CCNB3Q8WWL7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC40.99■■■■■ 4.15
CCNB3Q8WWL7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC40.98■■■■■ 4.15
CCNB3Q8WWL7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC40.98■■■■■ 4.15
CCNB3Q8WWL7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC40.97■■■■■ 4.15
CCNB3Q8WWL7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC40.97■■■■■ 4.15
CCNB3Q8WWL7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
CCNB3Q8WWL7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC40.95■■■■■ 4.15
CCNB3Q8WWL7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC40.94■■■■■ 4.14
CCNB3Q8WWL7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC40.93■■■■■ 4.14
CCNB3Q8WWL7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC40.93■■■■■ 4.14
CCNB3Q8WWL7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC40.93■■■■■ 4.14
CCNB3Q8WWL7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC40.93■■■■■ 4.14
CCNB3Q8WWL7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC40.92■■■■■ 4.14
CCNB3Q8WWL7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC40.92■■■■■ 4.14
CCNB3Q8WWL7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC40.91■■■■■ 4.14
CCNB3Q8WWL7 AL161658.1-201ENST00000623641 1967 ntBASIC40.91■■■■■ 4.14
CCNB3Q8WWL7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC40.9■■■■■ 4.14
CCNB3Q8WWL7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC40.9■■■■■ 4.14
CCNB3Q8WWL7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC40.9■■■■■ 4.14
CCNB3Q8WWL7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC40.9■■■■■ 4.14
CCNB3Q8WWL7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC40.88■■■■■ 4.13
CCNB3Q8WWL7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC40.87■■■■■ 4.13
CCNB3Q8WWL7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC40.87■■■■■ 4.13
CCNB3Q8WWL7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
CCNB3Q8WWL7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
CCNB3Q8WWL7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC40.86■■■■■ 4.13
CCNB3Q8WWL7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
CCNB3Q8WWL7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
CCNB3Q8WWL7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
CCNB3Q8WWL7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC40.85■■■■■ 4.13
CCNB3Q8WWL7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
CCNB3Q8WWL7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
CCNB3Q8WWL7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC40.84■■■■■ 4.13
CCNB3Q8WWL7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
CCNB3Q8WWL7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC40.83■■■■■ 4.13
CCNB3Q8WWL7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
CCNB3Q8WWL7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
CCNB3Q8WWL7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC40.81■■■■■ 4.12
CCNB3Q8WWL7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC40.81■■■■■ 4.12
CCNB3Q8WWL7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC40.8■■■■■ 4.12
CCNB3Q8WWL7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
CCNB3Q8WWL7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
CCNB3Q8WWL7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC40.77■■■■■ 4.12
CCNB3Q8WWL7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
CCNB3Q8WWL7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC40.76■■■■■ 4.12
CCNB3Q8WWL7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
CCNB3Q8WWL7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC40.75■■■■■ 4.11
CCNB3Q8WWL7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC40.75■■■■■ 4.11
CCNB3Q8WWL7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC40.74■■■■■ 4.11
CCNB3Q8WWL7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC40.74■■■■■ 4.11
CCNB3Q8WWL7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC40.74■■■■■ 4.11
CCNB3Q8WWL7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC40.73■■■■■ 4.11
CCNB3Q8WWL7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC40.73■■■■■ 4.11
CCNB3Q8WWL7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
CCNB3Q8WWL7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
CCNB3Q8WWL7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC40.72■■■■■ 4.11
CCNB3Q8WWL7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L13-201ENST00000554103 1267 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L15-201ENST00000611059 1267 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L23-201ENST00000615195 1269 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L24-201ENST00000617576 1269 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L22-201ENST00000618238 1269 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L20-201ENST00000619712 1269 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L21-201ENST00000622058 1269 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L10-201ENST00000622460 1267 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 DUX4L25-201ENST00000624915 1269 ntBASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
CCNB3Q8WWL7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.11
CCNB3Q8WWL7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC40.69■■■■■ 4.1
CCNB3Q8WWL7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC40.69■■■■■ 4.1
CCNB3Q8WWL7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
CCNB3Q8WWL7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
CCNB3Q8WWL7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
CCNB3Q8WWL7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC40.68■■■■■ 4.1
CCNB3Q8WWL7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC40.67■■■■■ 4.1
CCNB3Q8WWL7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC40.67■■■■■ 4.1
CCNB3Q8WWL7 HSD17B1P1-201ENST00000590052 955 ntBASIC40.67■■■■■ 4.1
CCNB3Q8WWL7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC40.66■■■■■ 4.1
CCNB3Q8WWL7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC40.66■■■■■ 4.1
CCNB3Q8WWL7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC40.65■■■■■ 4.1
CCNB3Q8WWL7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
CCNB3Q8WWL7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC40.64■■■■■ 4.1
CCNB3Q8WWL7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
CCNB3Q8WWL7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC40.63■■■■■ 4.09
CCNB3Q8WWL7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC40.62■■■■■ 4.09
CCNB3Q8WWL7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC40.62■■■■■ 4.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms