Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AC044849.2-201ENST00000606596 710 ntBASIC24.1■■□□□ 1.45
RNF138Q8WVD3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RNF138Q8WVD3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RNF138Q8WVD3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RNF138Q8WVD3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.09■■□□□ 1.45
RNF138Q8WVD3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RNF138Q8WVD3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF138Q8WVD3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
RNF138Q8WVD3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RNF138Q8WVD3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RNF138Q8WVD3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.07■■□□□ 1.44
RNF138Q8WVD3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
RNF138Q8WVD3 AC108673.1-201ENST00000510422 1159 ntBASIC24.06■■□□□ 1.44
RNF138Q8WVD3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.06■■□□□ 1.44
RNF138Q8WVD3 MIR6090-201ENST00000622481 60 ntBASIC24.05■■□□□ 1.44
RNF138Q8WVD3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
RNF138Q8WVD3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF138Q8WVD3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF138Q8WVD3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF138Q8WVD3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF138Q8WVD3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RNF138Q8WVD3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RNF138Q8WVD3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.03■■□□□ 1.44
RNF138Q8WVD3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF138Q8WVD3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF138Q8WVD3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF138Q8WVD3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF138Q8WVD3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24■■□□□ 1.43
RNF138Q8WVD3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF138Q8WVD3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF138Q8WVD3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.98■■□□□ 1.43
RNF138Q8WVD3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF138Q8WVD3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
RNF138Q8WVD3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF138Q8WVD3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF138Q8WVD3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF138Q8WVD3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.96■■□□□ 1.43
RNF138Q8WVD3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF138Q8WVD3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF138Q8WVD3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RNF138Q8WVD3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF138Q8WVD3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RNF138Q8WVD3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF138Q8WVD3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF138Q8WVD3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF138Q8WVD3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF138Q8WVD3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF138Q8WVD3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF138Q8WVD3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF138Q8WVD3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF138Q8WVD3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RNF138Q8WVD3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF138Q8WVD3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF138Q8WVD3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF138Q8WVD3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF138Q8WVD3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RNF138Q8WVD3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF138Q8WVD3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF138Q8WVD3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RNF138Q8WVD3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF138Q8WVD3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF138Q8WVD3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RNF138Q8WVD3 ABCB10P1-201ENST00000614297 2181 ntBASIC23.88■■□□□ 1.41
RNF138Q8WVD3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
RNF138Q8WVD3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF138Q8WVD3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.87■■□□□ 1.41
RNF138Q8WVD3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF138Q8WVD3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF138Q8WVD3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF138Q8WVD3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.86■■□□□ 1.41
RNF138Q8WVD3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.86■■□□□ 1.41
RNF138Q8WVD3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RNF138Q8WVD3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RNF138Q8WVD3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF138Q8WVD3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF138Q8WVD3 AC127502.1-201ENST00000399971 1502 ntBASIC23.84■■□□□ 1.41
RNF138Q8WVD3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF138Q8WVD3 AC021231.2-201ENST00000594613 730 ntBASIC23.82■■□□□ 1.4
RNF138Q8WVD3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF138Q8WVD3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF138Q8WVD3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF138Q8WVD3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF138Q8WVD3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.79■■□□□ 1.4
RNF138Q8WVD3 DUX4L29-201ENST00000425409 679 ntBASIC23.79■■□□□ 1.4
RNF138Q8WVD3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF138Q8WVD3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF138Q8WVD3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF138Q8WVD3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF138Q8WVD3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RNF138Q8WVD3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RNF138Q8WVD3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RNF138Q8WVD3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms