Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
SH3TC2Q8TF17 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.41■■■□□ 2.46
SH3TC2Q8TF17 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC2Q8TF17 GPX1-201ENST00000419349 1106 ntBASIC30.39■■■□□ 2.46
SH3TC2Q8TF17 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SH3TC2Q8TF17 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.39■■■□□ 2.46
SH3TC2Q8TF17 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC2Q8TF17 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC2Q8TF17 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SH3TC2Q8TF17 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SH3TC2Q8TF17 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.36■■■□□ 2.45
SH3TC2Q8TF17 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
SH3TC2Q8TF17 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.34■■■□□ 2.45
SH3TC2Q8TF17 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SH3TC2Q8TF17 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SH3TC2Q8TF17 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.31■■■□□ 2.44
SH3TC2Q8TF17 RNF126P1-201ENST00000567452 1320 ntBASIC30.3■■■□□ 2.44
SH3TC2Q8TF17 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.3■■■□□ 2.44
SH3TC2Q8TF17 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SH3TC2Q8TF17 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
SH3TC2Q8TF17 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SH3TC2Q8TF17 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
SH3TC2Q8TF17 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SH3TC2Q8TF17 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
SH3TC2Q8TF17 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
SH3TC2Q8TF17 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.25■■■□□ 2.43
SH3TC2Q8TF17 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SH3TC2Q8TF17 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SH3TC2Q8TF17 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SH3TC2Q8TF17 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
SH3TC2Q8TF17 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.21■■■□□ 2.43
SH3TC2Q8TF17 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.2■■■□□ 2.43
SH3TC2Q8TF17 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.2■■■□□ 2.43
SH3TC2Q8TF17 AC012354.3-201ENST00000623734 483 ntBASIC30.19■■■□□ 2.42
SH3TC2Q8TF17 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
SH3TC2Q8TF17 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SH3TC2Q8TF17 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SH3TC2Q8TF17 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.17■■■□□ 2.42
SH3TC2Q8TF17 NTF6A-201ENST00000591175 560 ntBASIC30.17■■■□□ 2.42
SH3TC2Q8TF17 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SH3TC2Q8TF17 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.16■■■□□ 2.42
SH3TC2Q8TF17 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.16■■■□□ 2.42
SH3TC2Q8TF17 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
SH3TC2Q8TF17 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SH3TC2Q8TF17 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
SH3TC2Q8TF17 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SH3TC2Q8TF17 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SH3TC2Q8TF17 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.14■■■□□ 2.42
SH3TC2Q8TF17 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.14■■■□□ 2.42
SH3TC2Q8TF17 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.14■■■□□ 2.42
SH3TC2Q8TF17 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.14■■■□□ 2.41
SH3TC2Q8TF17 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SH3TC2Q8TF17 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
SH3TC2Q8TF17 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SH3TC2Q8TF17 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
SH3TC2Q8TF17 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.07■■■□□ 2.4
SH3TC2Q8TF17 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
SH3TC2Q8TF17 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
SH3TC2Q8TF17 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
SH3TC2Q8TF17 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
SH3TC2Q8TF17 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
SH3TC2Q8TF17 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SH3TC2Q8TF17 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SH3TC2Q8TF17 AL033527.3-201ENST00000566366 1196 ntBASIC30.01■■■□□ 2.39
SH3TC2Q8TF17 AC022413.1-201ENST00000624602 984 ntBASIC30.01■■■□□ 2.39
SH3TC2Q8TF17 AC008813.1-201ENST00000536597 885 ntBASIC30■■■□□ 2.39
SH3TC2Q8TF17 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30■■■□□ 2.39
SH3TC2Q8TF17 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.99■■■□□ 2.39
SH3TC2Q8TF17 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SH3TC2Q8TF17 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.98■■■□□ 2.39
SH3TC2Q8TF17 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.98■■■□□ 2.39
SH3TC2Q8TF17 AC018358.1-201ENST00000631079 1402 ntBASIC29.97■■■□□ 2.39
SH3TC2Q8TF17 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SH3TC2Q8TF17 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.96■■■□□ 2.39
SH3TC2Q8TF17 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
SH3TC2Q8TF17 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SH3TC2Q8TF17 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms