Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CCHCR1Q8TD31 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCHCR1Q8TD31 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CCHCR1Q8TD31 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCHCR1Q8TD31 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CCHCR1Q8TD31 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.17■■□□□ 1.94
CCHCR1Q8TD31 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCHCR1Q8TD31 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CCHCR1Q8TD31 AL391121.1-201ENST00000607967 1349 ntBASIC27.16■■□□□ 1.94
CCHCR1Q8TD31 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.16■■□□□ 1.94
CCHCR1Q8TD31 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CCHCR1Q8TD31 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.16■■□□□ 1.94
CCHCR1Q8TD31 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCHCR1Q8TD31 CAHM-201ENST00000604200 896 ntBASIC27.15■■□□□ 1.94
CCHCR1Q8TD31 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CCHCR1Q8TD31 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CCHCR1Q8TD31 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CCHCR1Q8TD31 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.14■■□□□ 1.93
CCHCR1Q8TD31 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CCHCR1Q8TD31 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
CCHCR1Q8TD31 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.12■■□□□ 1.93
CCHCR1Q8TD31 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.11■■□□□ 1.93
CCHCR1Q8TD31 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.11■■□□□ 1.93
CCHCR1Q8TD31 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCHCR1Q8TD31 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCHCR1Q8TD31 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.1■■□□□ 1.93
CCHCR1Q8TD31 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCHCR1Q8TD31 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCHCR1Q8TD31 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCHCR1Q8TD31 AC142086.6-201ENST00000621154 1765 ntBASIC27.09■■□□□ 1.93
CCHCR1Q8TD31 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCHCR1Q8TD31 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCHCR1Q8TD31 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.09■■□□□ 1.93
CCHCR1Q8TD31 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.09■■□□□ 1.93
CCHCR1Q8TD31 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
CCHCR1Q8TD31 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCHCR1Q8TD31 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCHCR1Q8TD31 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.08■■□□□ 1.93
CCHCR1Q8TD31 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCHCR1Q8TD31 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCHCR1Q8TD31 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCHCR1Q8TD31 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.06■■□□□ 1.92
CCHCR1Q8TD31 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCHCR1Q8TD31 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCHCR1Q8TD31 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCHCR1Q8TD31 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
CCHCR1Q8TD31 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
CCHCR1Q8TD31 SUZ12P1-203ENST00000578195 985 ntBASIC27.05■■□□□ 1.92
CCHCR1Q8TD31 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CCHCR1Q8TD31 AL139393.2-201ENST00000608721 2025 ntBASIC27.04■■□□□ 1.92
CCHCR1Q8TD31 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CCHCR1Q8TD31 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.04■■□□□ 1.92
CCHCR1Q8TD31 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CCHCR1Q8TD31 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CCHCR1Q8TD31 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCHCR1Q8TD31 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCHCR1Q8TD31 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCHCR1Q8TD31 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCHCR1Q8TD31 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCHCR1Q8TD31 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCHCR1Q8TD31 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CCHCR1Q8TD31 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCHCR1Q8TD31 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCHCR1Q8TD31 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.99■■□□□ 1.91
CCHCR1Q8TD31 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.99■■□□□ 1.91
CCHCR1Q8TD31 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CCHCR1Q8TD31 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
CCHCR1Q8TD31 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CCHCR1Q8TD31 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CCHCR1Q8TD31 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CCHCR1Q8TD31 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
CCHCR1Q8TD31 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CCHCR1Q8TD31 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CCHCR1Q8TD31 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
CCHCR1Q8TD31 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.95■■□□□ 1.9
CCHCR1Q8TD31 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
CCHCR1Q8TD31 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CCHCR1Q8TD31 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.95■■□□□ 1.9
CCHCR1Q8TD31 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CCHCR1Q8TD31 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
CCHCR1Q8TD31 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.92■■□□□ 1.9
CCHCR1Q8TD31 AC010864.1-201ENST00000609407 1511 ntBASIC26.91■■□□□ 1.9
CCHCR1Q8TD31 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCHCR1Q8TD31 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCHCR1Q8TD31 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCHCR1Q8TD31 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.9■■□□□ 1.9
CCHCR1Q8TD31 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CCHCR1Q8TD31 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCHCR1Q8TD31 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCHCR1Q8TD31 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
CCHCR1Q8TD31 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
CCHCR1Q8TD31 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCHCR1Q8TD31 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.86■■□□□ 1.89
CCHCR1Q8TD31 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCHCR1Q8TD31 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CCHCR1Q8TD31 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
CCHCR1Q8TD31 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.85■■□□□ 1.89
CCHCR1Q8TD31 DRD5P2-201ENST00000421395 2012 ntBASIC26.85■■□□□ 1.89
CCHCR1Q8TD31 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCHCR1Q8TD31 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms