Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.69■□□□□ 0.74
NUP35Q8NFH5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP35Q8NFH5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.68■□□□□ 0.74
NUP35Q8NFH5 AL139393.2-201ENST00000608721 2025 ntBASIC19.68■□□□□ 0.74
NUP35Q8NFH5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP35Q8NFH5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP35Q8NFH5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP35Q8NFH5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP35Q8NFH5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NUP35Q8NFH5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP35Q8NFH5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP35Q8NFH5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP35Q8NFH5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP35Q8NFH5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUP35Q8NFH5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP35Q8NFH5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP35Q8NFH5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NUP35Q8NFH5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP35Q8NFH5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
NUP35Q8NFH5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUP35Q8NFH5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NUP35Q8NFH5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
NUP35Q8NFH5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP35Q8NFH5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP35Q8NFH5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP35Q8NFH5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP35Q8NFH5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUP35Q8NFH5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP35Q8NFH5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NUP35Q8NFH5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.55■□□□□ 0.72
NUP35Q8NFH5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP35Q8NFH5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NUP35Q8NFH5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.52■□□□□ 0.72
NUP35Q8NFH5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUP35Q8NFH5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUP35Q8NFH5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.5■□□□□ 0.71
NUP35Q8NFH5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.5■□□□□ 0.71
NUP35Q8NFH5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUP35Q8NFH5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUP35Q8NFH5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NUP35Q8NFH5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP35Q8NFH5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUP35Q8NFH5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP35Q8NFH5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP35Q8NFH5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP35Q8NFH5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP35Q8NFH5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP35Q8NFH5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NUP35Q8NFH5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.44■□□□□ 0.7
NUP35Q8NFH5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP35Q8NFH5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP35Q8NFH5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NUP35Q8NFH5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP35Q8NFH5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP35Q8NFH5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 BX255925.1-201ENST00000566954 1854 ntBASIC19.41■□□□□ 0.7
NUP35Q8NFH5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms