Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.69■□□□□ 0.74
NUP35Q8NFH5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP35Q8NFH5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.68■□□□□ 0.74
NUP35Q8NFH5 AL139393.2-201ENST00000608721 2025 ntBASIC19.68■□□□□ 0.74
NUP35Q8NFH5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NUP35Q8NFH5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NUP35Q8NFH5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP35Q8NFH5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP35Q8NFH5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP35Q8NFH5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP35Q8NFH5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NUP35Q8NFH5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP35Q8NFH5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP35Q8NFH5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP35Q8NFH5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP35Q8NFH5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUP35Q8NFH5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
NUP35Q8NFH5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUP35Q8NFH5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP35Q8NFH5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP35Q8NFH5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NUP35Q8NFH5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP35Q8NFH5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
NUP35Q8NFH5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUP35Q8NFH5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NUP35Q8NFH5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
NUP35Q8NFH5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP35Q8NFH5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP35Q8NFH5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP35Q8NFH5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP35Q8NFH5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUP35Q8NFH5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP35Q8NFH5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NUP35Q8NFH5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.55■□□□□ 0.72
NUP35Q8NFH5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NUP35Q8NFH5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NUP35Q8NFH5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NUP35Q8NFH5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.52■□□□□ 0.72
NUP35Q8NFH5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUP35Q8NFH5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NUP35Q8NFH5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NUP35Q8NFH5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.5■□□□□ 0.71
NUP35Q8NFH5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.5■□□□□ 0.71
NUP35Q8NFH5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NUP35Q8NFH5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUP35Q8NFH5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NUP35Q8NFH5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP35Q8NFH5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUP35Q8NFH5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP35Q8NFH5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP35Q8NFH5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP35Q8NFH5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP35Q8NFH5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP35Q8NFH5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP35Q8NFH5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NUP35Q8NFH5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.44■□□□□ 0.7
NUP35Q8NFH5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP35Q8NFH5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP35Q8NFH5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NUP35Q8NFH5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP35Q8NFH5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.42■□□□□ 0.7
NUP35Q8NFH5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 BX255925.1-201ENST00000566954 1854 ntBASIC19.41■□□□□ 0.7
NUP35Q8NFH5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NUP35Q8NFH5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms