Protein–RNA interactions for Protein: Q8NDZ4

C3orf58, Deleted in autism protein 1, humanhuman

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58Q8NDZ4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
C3orf58Q8NDZ4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
C3orf58Q8NDZ4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
C3orf58Q8NDZ4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
C3orf58Q8NDZ4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
C3orf58Q8NDZ4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.34■■■□□ 2.13
C3orf58Q8NDZ4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
C3orf58Q8NDZ4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.34■■■□□ 2.13
C3orf58Q8NDZ4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
C3orf58Q8NDZ4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
C3orf58Q8NDZ4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
C3orf58Q8NDZ4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
C3orf58Q8NDZ4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
C3orf58Q8NDZ4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
C3orf58Q8NDZ4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.32■■■□□ 2.12
C3orf58Q8NDZ4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
C3orf58Q8NDZ4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
C3orf58Q8NDZ4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
C3orf58Q8NDZ4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
C3orf58Q8NDZ4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
C3orf58Q8NDZ4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
C3orf58Q8NDZ4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
C3orf58Q8NDZ4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.29■■■□□ 2.12
C3orf58Q8NDZ4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
C3orf58Q8NDZ4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
C3orf58Q8NDZ4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
C3orf58Q8NDZ4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.28■■■□□ 2.12
C3orf58Q8NDZ4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
C3orf58Q8NDZ4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
C3orf58Q8NDZ4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.25■■■□□ 2.11
C3orf58Q8NDZ4 AC010864.1-201ENST00000609407 1511 ntBASIC28.25■■■□□ 2.11
C3orf58Q8NDZ4 HLA-V-202ENST00000446817 847 ntBASIC28.25■■■□□ 2.11
C3orf58Q8NDZ4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
C3orf58Q8NDZ4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.23■■■□□ 2.11
C3orf58Q8NDZ4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.23■■■□□ 2.11
C3orf58Q8NDZ4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
C3orf58Q8NDZ4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
C3orf58Q8NDZ4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
C3orf58Q8NDZ4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
C3orf58Q8NDZ4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
C3orf58Q8NDZ4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.2■■■□□ 2.1
C3orf58Q8NDZ4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
C3orf58Q8NDZ4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
C3orf58Q8NDZ4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
C3orf58Q8NDZ4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.18■■■□□ 2.1
C3orf58Q8NDZ4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
C3orf58Q8NDZ4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.17■■■□□ 2.1
C3orf58Q8NDZ4 LINC01971-201ENST00000617888 1048 ntBASIC28.17■■■□□ 2.1
C3orf58Q8NDZ4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
C3orf58Q8NDZ4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.16■■■□□ 2.1
C3orf58Q8NDZ4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.16■■■□□ 2.1
C3orf58Q8NDZ4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.14■■■□□ 2.1
C3orf58Q8NDZ4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
C3orf58Q8NDZ4 DUX4L11-201ENST00000611504 1267 ntBASIC28.14■■■□□ 2.1
C3orf58Q8NDZ4 DUX4L12-201ENST00000614593 1267 ntBASIC28.14■■■□□ 2.1
C3orf58Q8NDZ4 DUX4L14-201ENST00000621227 1267 ntBASIC28.14■■■□□ 2.1
C3orf58Q8NDZ4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.13■■■□□ 2.09
C3orf58Q8NDZ4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
C3orf58Q8NDZ4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.12■■■□□ 2.09
C3orf58Q8NDZ4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
C3orf58Q8NDZ4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.11■■■□□ 2.09
C3orf58Q8NDZ4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.11■■■□□ 2.09
C3orf58Q8NDZ4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
C3orf58Q8NDZ4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
C3orf58Q8NDZ4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
C3orf58Q8NDZ4 MIR3648-2-201ENST00000581792 180 ntBASIC28.09■■■□□ 2.09
C3orf58Q8NDZ4 MIR3648-1-201ENST00000615959 180 ntBASIC28.09■■■□□ 2.09
C3orf58Q8NDZ4 AL135925.1-201ENST00000605920 1701 ntBASIC28.09■■■□□ 2.09
C3orf58Q8NDZ4 CR559946.2-201ENST00000623684 991 ntBASIC28.08■■■□□ 2.09
C3orf58Q8NDZ4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.07■■■□□ 2.08
C3orf58Q8NDZ4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.07■■■□□ 2.08
C3orf58Q8NDZ4 AC016575.1-201ENST00000607026 382 ntBASIC28.07■■■□□ 2.08
C3orf58Q8NDZ4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.07■■■□□ 2.08
C3orf58Q8NDZ4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
C3orf58Q8NDZ4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.06■■■□□ 2.08
C3orf58Q8NDZ4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
C3orf58Q8NDZ4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.04■■■□□ 2.08
C3orf58Q8NDZ4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
C3orf58Q8NDZ4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
C3orf58Q8NDZ4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
C3orf58Q8NDZ4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
C3orf58Q8NDZ4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
C3orf58Q8NDZ4 MIR639-201ENST00000384974 98 ntBASIC28.01■■■□□ 2.07
C3orf58Q8NDZ4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.01■■■□□ 2.07
C3orf58Q8NDZ4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.01■■■□□ 2.07
C3orf58Q8NDZ4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
C3orf58Q8NDZ4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28■■■□□ 2.07
C3orf58Q8NDZ4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28■■■□□ 2.07
C3orf58Q8NDZ4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
C3orf58Q8NDZ4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28■■■□□ 2.07
C3orf58Q8NDZ4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
C3orf58Q8NDZ4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
C3orf58Q8NDZ4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
C3orf58Q8NDZ4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.99■■■□□ 2.07
C3orf58Q8NDZ4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.99■■■□□ 2.07
C3orf58Q8NDZ4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
C3orf58Q8NDZ4 LINC00273-201ENST00000539813 1452 ntBASIC27.98■■■□□ 2.07
C3orf58Q8NDZ4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
C3orf58Q8NDZ4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
C3orf58Q8NDZ4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms