Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 DUX4L12-201ENST00000614593 1267 ntBASIC28.75■■■□□ 2.19
RNF169Q8NCN4 DUX4L14-201ENST00000621227 1267 ntBASIC28.75■■■□□ 2.19
RNF169Q8NCN4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RNF169Q8NCN4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.74■■■□□ 2.19
RNF169Q8NCN4 LINC01971-201ENST00000617888 1048 ntBASIC28.74■■■□□ 2.19
RNF169Q8NCN4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RNF169Q8NCN4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.74■■■□□ 2.19
RNF169Q8NCN4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.73■■■□□ 2.19
RNF169Q8NCN4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RNF169Q8NCN4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
RNF169Q8NCN4 MIR3648-2-201ENST00000581792 180 ntBASIC28.72■■■□□ 2.19
RNF169Q8NCN4 MIR3648-1-201ENST00000615959 180 ntBASIC28.72■■■□□ 2.19
RNF169Q8NCN4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RNF169Q8NCN4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RNF169Q8NCN4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF169Q8NCN4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF169Q8NCN4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF169Q8NCN4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.71■■■□□ 2.19
RNF169Q8NCN4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.71■■■□□ 2.19
RNF169Q8NCN4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF169Q8NCN4 MIR639-201ENST00000384974 98 ntBASIC28.7■■■□□ 2.18
RNF169Q8NCN4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF169Q8NCN4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.68■■■□□ 2.18
RNF169Q8NCN4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RNF169Q8NCN4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RNF169Q8NCN4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RNF169Q8NCN4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.66■■■□□ 2.18
RNF169Q8NCN4 CR559946.2-201ENST00000623684 991 ntBASIC28.66■■■□□ 2.18
RNF169Q8NCN4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RNF169Q8NCN4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
RNF169Q8NCN4 MIR4449-201ENST00000578365 66 ntBASIC28.65■■■□□ 2.18
RNF169Q8NCN4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RNF169Q8NCN4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.64■■■□□ 2.18
RNF169Q8NCN4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.64■■■□□ 2.18
RNF169Q8NCN4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
RNF169Q8NCN4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.63■■■□□ 2.17
RNF169Q8NCN4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.63■■■□□ 2.17
RNF169Q8NCN4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.62■■■□□ 2.17
RNF169Q8NCN4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RNF169Q8NCN4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RNF169Q8NCN4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RNF169Q8NCN4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF169Q8NCN4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.57■■■□□ 2.16
RNF169Q8NCN4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.55■■■□□ 2.16
RNF169Q8NCN4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RNF169Q8NCN4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.54■■■□□ 2.16
RNF169Q8NCN4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF169Q8NCN4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF169Q8NCN4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF169Q8NCN4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF169Q8NCN4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF169Q8NCN4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF169Q8NCN4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
RNF169Q8NCN4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.52■■■□□ 2.16
RNF169Q8NCN4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
RNF169Q8NCN4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.52■■■□□ 2.16
RNF169Q8NCN4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.51■■■□□ 2.16
RNF169Q8NCN4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF169Q8NCN4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF169Q8NCN4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF169Q8NCN4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.51■■■□□ 2.15
RNF169Q8NCN4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
RNF169Q8NCN4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RNF169Q8NCN4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.5■■■□□ 2.15
RNF169Q8NCN4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.5■■■□□ 2.15
RNF169Q8NCN4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RNF169Q8NCN4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
RNF169Q8NCN4 AC010864.1-201ENST00000609407 1511 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L13-201ENST00000554103 1267 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L15-201ENST00000611059 1267 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L23-201ENST00000615195 1269 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L24-201ENST00000617576 1269 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L22-201ENST00000618238 1269 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L20-201ENST00000619712 1269 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L21-201ENST00000622058 1269 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L10-201ENST00000622460 1267 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 DUX4L25-201ENST00000624915 1269 ntBASIC28.49■■■□□ 2.15
RNF169Q8NCN4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RNF169Q8NCN4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RNF169Q8NCN4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RNF169Q8NCN4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RNF169Q8NCN4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RNF169Q8NCN4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RNF169Q8NCN4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF169Q8NCN4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
RNF169Q8NCN4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
RNF169Q8NCN4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
RNF169Q8NCN4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.45■■■□□ 2.14
RNF169Q8NCN4 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.45■■■□□ 2.14
RNF169Q8NCN4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
RNF169Q8NCN4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.14
RNF169Q8NCN4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RNF169Q8NCN4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RNF169Q8NCN4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
RNF169Q8NCN4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
RNF169Q8NCN4 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.43■■■□□ 2.14
RNF169Q8NCN4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.43■■■□□ 2.14
RNF169Q8NCN4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms