Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.79■■□□□ 1.72
CCNYL1Q8N7R7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCNYL1Q8N7R7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCNYL1Q8N7R7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.77■■□□□ 1.72
CCNYL1Q8N7R7 AL139393.2-201ENST00000608721 2025 ntBASIC25.77■■□□□ 1.72
CCNYL1Q8N7R7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCNYL1Q8N7R7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
CCNYL1Q8N7R7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.76■■□□□ 1.71
CCNYL1Q8N7R7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
CCNYL1Q8N7R7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCNYL1Q8N7R7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCNYL1Q8N7R7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CCNYL1Q8N7R7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCNYL1Q8N7R7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCNYL1Q8N7R7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CCNYL1Q8N7R7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCNYL1Q8N7R7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCNYL1Q8N7R7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CCNYL1Q8N7R7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
CCNYL1Q8N7R7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CCNYL1Q8N7R7 AC142086.6-201ENST00000621154 1765 ntBASIC25.72■■□□□ 1.71
CCNYL1Q8N7R7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CCNYL1Q8N7R7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCNYL1Q8N7R7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCNYL1Q8N7R7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CCNYL1Q8N7R7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
CCNYL1Q8N7R7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CCNYL1Q8N7R7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
CCNYL1Q8N7R7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CCNYL1Q8N7R7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCNYL1Q8N7R7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.69■■□□□ 1.7
CCNYL1Q8N7R7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCNYL1Q8N7R7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CCNYL1Q8N7R7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.68■■□□□ 1.7
CCNYL1Q8N7R7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCNYL1Q8N7R7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCNYL1Q8N7R7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CCNYL1Q8N7R7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CCNYL1Q8N7R7 AC010864.1-201ENST00000609407 1511 ntBASIC25.67■■□□□ 1.7
CCNYL1Q8N7R7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.66■■□□□ 1.7
CCNYL1Q8N7R7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.65■■□□□ 1.7
CCNYL1Q8N7R7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCNYL1Q8N7R7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.65■■□□□ 1.7
CCNYL1Q8N7R7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCNYL1Q8N7R7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCNYL1Q8N7R7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCNYL1Q8N7R7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
CCNYL1Q8N7R7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.63■■□□□ 1.69
CCNYL1Q8N7R7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNYL1Q8N7R7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCNYL1Q8N7R7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCNYL1Q8N7R7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCNYL1Q8N7R7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCNYL1Q8N7R7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCNYL1Q8N7R7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.61■■□□□ 1.69
CCNYL1Q8N7R7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCNYL1Q8N7R7 RARRES2P7-201ENST00000567349 469 ntBASIC25.61■■□□□ 1.69
CCNYL1Q8N7R7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.6■■□□□ 1.69
CCNYL1Q8N7R7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNYL1Q8N7R7 DRD5P2-201ENST00000421395 2012 ntBASIC25.59■■□□□ 1.69
CCNYL1Q8N7R7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.59■■□□□ 1.69
CCNYL1Q8N7R7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CCNYL1Q8N7R7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCNYL1Q8N7R7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CCNYL1Q8N7R7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.59■■□□□ 1.69
CCNYL1Q8N7R7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CCNYL1Q8N7R7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
CCNYL1Q8N7R7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.58■■□□□ 1.69
CCNYL1Q8N7R7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CCNYL1Q8N7R7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCNYL1Q8N7R7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CCNYL1Q8N7R7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.56■■□□□ 1.68
CCNYL1Q8N7R7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNYL1Q8N7R7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNYL1Q8N7R7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNYL1Q8N7R7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNYL1Q8N7R7 SETD8P1-201ENST00000623146 1180 ntBASIC25.55■■□□□ 1.68
CCNYL1Q8N7R7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CCNYL1Q8N7R7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNYL1Q8N7R7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CCNYL1Q8N7R7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CCNYL1Q8N7R7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.54■■□□□ 1.68
CCNYL1Q8N7R7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCNYL1Q8N7R7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
CCNYL1Q8N7R7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.53■■□□□ 1.68
CCNYL1Q8N7R7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCNYL1Q8N7R7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.52■■□□□ 1.68
CCNYL1Q8N7R7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CCNYL1Q8N7R7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCNYL1Q8N7R7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CCNYL1Q8N7R7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCNYL1Q8N7R7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCNYL1Q8N7R7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.5■■□□□ 1.67
CCNYL1Q8N7R7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNYL1Q8N7R7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCNYL1Q8N7R7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.49■■□□□ 1.67
CCNYL1Q8N7R7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNYL1Q8N7R7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNYL1Q8N7R7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNYL1Q8N7R7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms