Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 ABCB10P3-201ENST00000561950 2166 ntBASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TTC9CQ8N5M4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TTC9CQ8N5M4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC9CQ8N5M4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC9CQ8N5M4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC9CQ8N5M4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TTC9CQ8N5M4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC9CQ8N5M4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.68■□□□□ 0.9
TTC9CQ8N5M4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC9CQ8N5M4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TTC9CQ8N5M4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TTC9CQ8N5M4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC9CQ8N5M4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC9CQ8N5M4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC9CQ8N5M4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC9CQ8N5M4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC9CQ8N5M4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TTC9CQ8N5M4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
TTC9CQ8N5M4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.66■□□□□ 0.9
TTC9CQ8N5M4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TTC9CQ8N5M4 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.65■□□□□ 0.9
TTC9CQ8N5M4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.65■□□□□ 0.9
TTC9CQ8N5M4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TTC9CQ8N5M4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC9CQ8N5M4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC9CQ8N5M4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC9CQ8N5M4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TTC9CQ8N5M4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC9CQ8N5M4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TTC9CQ8N5M4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.62■□□□□ 0.89
TTC9CQ8N5M4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC9CQ8N5M4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 AC005559.1-201ENST00000589661 871 ntBASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9CQ8N5M4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TTC9CQ8N5M4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9CQ8N5M4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9CQ8N5M4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC9CQ8N5M4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.59■□□□□ 0.89
TTC9CQ8N5M4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9CQ8N5M4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TTC9CQ8N5M4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9CQ8N5M4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TTC9CQ8N5M4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC9CQ8N5M4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC9CQ8N5M4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
TTC9CQ8N5M4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC9CQ8N5M4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TTC9CQ8N5M4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC9CQ8N5M4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.56■□□□□ 0.88
TTC9CQ8N5M4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC9CQ8N5M4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC9CQ8N5M4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TTC9CQ8N5M4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC9CQ8N5M4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.54■□□□□ 0.88
TTC9CQ8N5M4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
TTC9CQ8N5M4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
TTC9CQ8N5M4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC9CQ8N5M4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC9CQ8N5M4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TTC9CQ8N5M4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC9CQ8N5M4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC9CQ8N5M4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC9CQ8N5M4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.52■□□□□ 0.88
TTC9CQ8N5M4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC9CQ8N5M4 AC139426.1-201ENST00000568218 2529 ntBASIC20.52■□□□□ 0.88
TTC9CQ8N5M4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TTC9CQ8N5M4 MIR3665-201ENST00000578708 105 ntBASIC20.52■□□□□ 0.88
TTC9CQ8N5M4 AP006261.1-201ENST00000584783 668 ntBASIC20.52■□□□□ 0.88
TTC9CQ8N5M4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.51■□□□□ 0.87
TTC9CQ8N5M4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TTC9CQ8N5M4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.51■□□□□ 0.87
TTC9CQ8N5M4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.51■□□□□ 0.87
TTC9CQ8N5M4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TTC9CQ8N5M4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.51■□□□□ 0.87
TTC9CQ8N5M4 AL139393.2-201ENST00000608721 2025 ntBASIC20.51■□□□□ 0.87
TTC9CQ8N5M4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.51■□□□□ 0.87
TTC9CQ8N5M4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.5■□□□□ 0.87
TTC9CQ8N5M4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC9CQ8N5M4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TTC9CQ8N5M4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.49■□□□□ 0.87
TTC9CQ8N5M4 DUX4L28-201ENST00000623687 678 ntBASIC20.49■□□□□ 0.87
TTC9CQ8N5M4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TTC9CQ8N5M4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TTC9CQ8N5M4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.47■□□□□ 0.87
TTC9CQ8N5M4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TTC9CQ8N5M4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms