Protein–RNA interactions for Protein: Q8N0V5

GCNT2, N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT2Q8N0V5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
GCNT2Q8N0V5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
GCNT2Q8N0V5 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
GCNT2Q8N0V5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
GCNT2Q8N0V5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
GCNT2Q8N0V5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
GCNT2Q8N0V5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
GCNT2Q8N0V5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
GCNT2Q8N0V5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
GCNT2Q8N0V5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
GCNT2Q8N0V5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
GCNT2Q8N0V5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
GCNT2Q8N0V5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
GCNT2Q8N0V5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.44■■□□□ 1.34
GCNT2Q8N0V5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
GCNT2Q8N0V5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
GCNT2Q8N0V5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
GCNT2Q8N0V5 HLA-V-202ENST00000446817 847 ntBASIC23.42■■□□□ 1.34
GCNT2Q8N0V5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
GCNT2Q8N0V5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
GCNT2Q8N0V5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.42■■□□□ 1.34
GCNT2Q8N0V5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
GCNT2Q8N0V5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
GCNT2Q8N0V5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
GCNT2Q8N0V5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
GCNT2Q8N0V5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.4■■□□□ 1.34
GCNT2Q8N0V5 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.39■■□□□ 1.33
GCNT2Q8N0V5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.39■■□□□ 1.33
GCNT2Q8N0V5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
GCNT2Q8N0V5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
GCNT2Q8N0V5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
GCNT2Q8N0V5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.37■■□□□ 1.33
GCNT2Q8N0V5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
GCNT2Q8N0V5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
GCNT2Q8N0V5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.36■■□□□ 1.33
GCNT2Q8N0V5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
GCNT2Q8N0V5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GCNT2Q8N0V5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
GCNT2Q8N0V5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
GCNT2Q8N0V5 AC010864.1-201ENST00000609407 1511 ntBASIC23.34■■□□□ 1.33
GCNT2Q8N0V5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.34■■□□□ 1.33
GCNT2Q8N0V5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.34■■□□□ 1.33
GCNT2Q8N0V5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
GCNT2Q8N0V5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
GCNT2Q8N0V5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
GCNT2Q8N0V5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GCNT2Q8N0V5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.32■■□□□ 1.32
GCNT2Q8N0V5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.31■■□□□ 1.32
GCNT2Q8N0V5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.31■■□□□ 1.32
GCNT2Q8N0V5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
GCNT2Q8N0V5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GCNT2Q8N0V5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
GCNT2Q8N0V5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GCNT2Q8N0V5 LINC01971-201ENST00000617888 1048 ntBASIC23.29■■□□□ 1.32
GCNT2Q8N0V5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
GCNT2Q8N0V5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
GCNT2Q8N0V5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
GCNT2Q8N0V5 DUX4L11-201ENST00000611504 1267 ntBASIC23.27■■□□□ 1.32
GCNT2Q8N0V5 DUX4L12-201ENST00000614593 1267 ntBASIC23.27■■□□□ 1.32
GCNT2Q8N0V5 DUX4L14-201ENST00000621227 1267 ntBASIC23.27■■□□□ 1.32
GCNT2Q8N0V5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
GCNT2Q8N0V5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.26■■□□□ 1.31
GCNT2Q8N0V5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
GCNT2Q8N0V5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.25■■□□□ 1.31
GCNT2Q8N0V5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.25■■□□□ 1.31
GCNT2Q8N0V5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
GCNT2Q8N0V5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.23■■□□□ 1.31
GCNT2Q8N0V5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.23■■□□□ 1.31
GCNT2Q8N0V5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.23■■□□□ 1.31
GCNT2Q8N0V5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
GCNT2Q8N0V5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
GCNT2Q8N0V5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.21■■□□□ 1.31
GCNT2Q8N0V5 AC016575.1-201ENST00000607026 382 ntBASIC23.21■■□□□ 1.31
GCNT2Q8N0V5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.21■■□□□ 1.31
GCNT2Q8N0V5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
GCNT2Q8N0V5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT2Q8N0V5 MIR3648-2-201ENST00000581792 180 ntBASIC23.2■■□□□ 1.3
GCNT2Q8N0V5 MIR3648-1-201ENST00000615959 180 ntBASIC23.2■■□□□ 1.3
GCNT2Q8N0V5 AL135925.1-201ENST00000605920 1701 ntBASIC23.19■■□□□ 1.3
GCNT2Q8N0V5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.19■■□□□ 1.3
GCNT2Q8N0V5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.19■■□□□ 1.3
GCNT2Q8N0V5 CR559946.2-201ENST00000623684 991 ntBASIC23.19■■□□□ 1.3
GCNT2Q8N0V5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GCNT2Q8N0V5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
GCNT2Q8N0V5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.18■■□□□ 1.3
GCNT2Q8N0V5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.18■■□□□ 1.3
GCNT2Q8N0V5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.18■■□□□ 1.3
GCNT2Q8N0V5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT2Q8N0V5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT2Q8N0V5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT2Q8N0V5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT2Q8N0V5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT2Q8N0V5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
GCNT2Q8N0V5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.17■■□□□ 1.3
GCNT2Q8N0V5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT2Q8N0V5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
GCNT2Q8N0V5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
GCNT2Q8N0V5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.16■■□□□ 1.3
GCNT2Q8N0V5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GCNT2Q8N0V5 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms