Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.79■■■□□ 2.36
RNF180Q86T96 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RNF180Q86T96 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RNF180Q86T96 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
RNF180Q86T96 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.77■■■□□ 2.36
RNF180Q86T96 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.77■■■□□ 2.36
RNF180Q86T96 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.77■■■□□ 2.36
RNF180Q86T96 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
RNF180Q86T96 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.76■■■□□ 2.35
RNF180Q86T96 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.76■■■□□ 2.35
RNF180Q86T96 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.76■■■□□ 2.35
RNF180Q86T96 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF180Q86T96 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.74■■■□□ 2.35
RNF180Q86T96 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
RNF180Q86T96 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.74■■■□□ 2.35
RNF180Q86T96 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
RNF180Q86T96 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RNF180Q86T96 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.72■■■□□ 2.35
RNF180Q86T96 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RNF180Q86T96 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.71■■■□□ 2.35
RNF180Q86T96 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.71■■■□□ 2.35
RNF180Q86T96 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
RNF180Q86T96 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RNF180Q86T96 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RNF180Q86T96 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.67■■■□□ 2.34
RNF180Q86T96 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
RNF180Q86T96 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
RNF180Q86T96 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.66■■■□□ 2.34
RNF180Q86T96 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RNF180Q86T96 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RNF180Q86T96 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RNF180Q86T96 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RNF180Q86T96 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RNF180Q86T96 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
RNF180Q86T96 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RNF180Q86T96 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RNF180Q86T96 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RNF180Q86T96 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.61■■■□□ 2.33
RNF180Q86T96 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RNF180Q86T96 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
RNF180Q86T96 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RNF180Q86T96 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RNF180Q86T96 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
RNF180Q86T96 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
RNF180Q86T96 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
RNF180Q86T96 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RNF180Q86T96 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.59■■■□□ 2.33
RNF180Q86T96 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.57■■■□□ 2.32
RNF180Q86T96 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.56■■■□□ 2.32
RNF180Q86T96 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.56■■■□□ 2.32
RNF180Q86T96 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.55■■■□□ 2.32
RNF180Q86T96 RARRES2P2-201ENST00000394842 485 ntBASIC29.55■■■□□ 2.32
RNF180Q86T96 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.55■■■□□ 2.32
RNF180Q86T96 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RNF180Q86T96 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RNF180Q86T96 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RNF180Q86T96 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.54■■■□□ 2.32
RNF180Q86T96 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
RNF180Q86T96 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
RNF180Q86T96 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.53■■■□□ 2.32
RNF180Q86T96 AC120057.4-201ENST00000624722 1615 ntBASIC29.53■■■□□ 2.32
RNF180Q86T96 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RNF180Q86T96 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.52■■■□□ 2.32
RNF180Q86T96 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
RNF180Q86T96 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.51■■■□□ 2.31
RNF180Q86T96 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RNF180Q86T96 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
RNF180Q86T96 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
RNF180Q86T96 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
RNF180Q86T96 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RNF180Q86T96 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.49■■■□□ 2.31
RNF180Q86T96 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
RNF180Q86T96 ABHD17AP5-201ENST00000580133 923 ntBASIC29.48■■■□□ 2.31
RNF180Q86T96 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RNF180Q86T96 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RNF180Q86T96 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.47■■■□□ 2.31
RNF180Q86T96 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.47■■■□□ 2.31
RNF180Q86T96 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RNF180Q86T96 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RNF180Q86T96 GPX1-201ENST00000419349 1106 ntBASIC29.46■■■□□ 2.31
RNF180Q86T96 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.45■■■□□ 2.31
RNF180Q86T96 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RNF180Q86T96 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.45■■■□□ 2.3
RNF180Q86T96 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RNF180Q86T96 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RNF180Q86T96 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.43■■■□□ 2.3
RNF180Q86T96 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RNF180Q86T96 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RNF180Q86T96 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RNF180Q86T96 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.42■■■□□ 2.3
RNF180Q86T96 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RNF180Q86T96 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
RNF180Q86T96 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RNF180Q86T96 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RNF180Q86T96 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RNF180Q86T96 RNF126P1-201ENST00000567452 1320 ntBASIC29.4■■■□□ 2.3
RNF180Q86T96 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
RNF180Q86T96 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RNF180Q86T96 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RNF180Q86T96 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms