Protein–RNA interactions for Protein: P98066

TNFAIP6, Tumor necrosis factor-inducible gene 6 protein, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP6P98066 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.36■■□□□ 1.17
TNFAIP6P98066 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.36■■□□□ 1.17
TNFAIP6P98066 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFAIP6P98066 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.36■■□□□ 1.17
TNFAIP6P98066 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
TNFAIP6P98066 AC010864.1-201ENST00000609407 1511 ntBASIC22.36■■□□□ 1.17
TNFAIP6P98066 AL135925.1-201ENST00000605920 1701 ntBASIC22.35■■□□□ 1.17
TNFAIP6P98066 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFAIP6P98066 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.34■■□□□ 1.17
TNFAIP6P98066 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.34■■□□□ 1.17
TNFAIP6P98066 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFAIP6P98066 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFAIP6P98066 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
TNFAIP6P98066 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFAIP6P98066 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFAIP6P98066 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TNFAIP6P98066 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TNFAIP6P98066 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFAIP6P98066 MIR6090-201ENST00000622481 60 ntBASIC22.32■■□□□ 1.16
TNFAIP6P98066 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.31■■□□□ 1.16
TNFAIP6P98066 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
TNFAIP6P98066 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNFAIP6P98066 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.29■■□□□ 1.16
TNFAIP6P98066 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TNFAIP6P98066 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.29■■□□□ 1.16
TNFAIP6P98066 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNFAIP6P98066 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
TNFAIP6P98066 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TNFAIP6P98066 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.28■■□□□ 1.16
TNFAIP6P98066 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.28■■□□□ 1.16
TNFAIP6P98066 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TNFAIP6P98066 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TNFAIP6P98066 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.26■■□□□ 1.15
TNFAIP6P98066 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TNFAIP6P98066 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.26■■□□□ 1.15
TNFAIP6P98066 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFAIP6P98066 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.25■■□□□ 1.15
TNFAIP6P98066 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFAIP6P98066 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFAIP6P98066 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFAIP6P98066 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNFAIP6P98066 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.22■■□□□ 1.15
TNFAIP6P98066 DUX4L29-201ENST00000425409 679 ntBASIC22.22■■□□□ 1.15
TNFAIP6P98066 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
TNFAIP6P98066 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNFAIP6P98066 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.21■■□□□ 1.15
TNFAIP6P98066 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNFAIP6P98066 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.21■■□□□ 1.15
TNFAIP6P98066 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.21■■□□□ 1.15
TNFAIP6P98066 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.21■■□□□ 1.15
TNFAIP6P98066 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TNFAIP6P98066 ST7-AS1-201ENST00000456775 1889 ntBASIC22.2■■□□□ 1.14
TNFAIP6P98066 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNFAIP6P98066 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TNFAIP6P98066 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNFAIP6P98066 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.18■■□□□ 1.14
TNFAIP6P98066 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
TNFAIP6P98066 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TNFAIP6P98066 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.18■■□□□ 1.14
TNFAIP6P98066 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNFAIP6P98066 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNFAIP6P98066 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TNFAIP6P98066 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNFAIP6P98066 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNFAIP6P98066 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.16■■□□□ 1.14
TNFAIP6P98066 AC021231.2-201ENST00000594613 730 ntBASIC22.16■■□□□ 1.14
TNFAIP6P98066 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNFAIP6P98066 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.15■■□□□ 1.14
TNFAIP6P98066 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNFAIP6P98066 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TNFAIP6P98066 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TNFAIP6P98066 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TNFAIP6P98066 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.14■■□□□ 1.13
TNFAIP6P98066 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TNFAIP6P98066 ABHD17AP4-201ENST00000411545 909 ntBASIC22.13■■□□□ 1.13
TNFAIP6P98066 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNFAIP6P98066 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNFAIP6P98066 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TNFAIP6P98066 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
TNFAIP6P98066 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
TNFAIP6P98066 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFAIP6P98066 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFAIP6P98066 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFAIP6P98066 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.11■■□□□ 1.13
TNFAIP6P98066 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFAIP6P98066 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TNFAIP6P98066 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNFAIP6P98066 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
TNFAIP6P98066 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TNFAIP6P98066 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
TNFAIP6P98066 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
TNFAIP6P98066 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
TNFAIP6P98066 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNFAIP6P98066 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TNFAIP6P98066 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNFAIP6P98066 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TNFAIP6P98066 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
TNFAIP6P98066 AC127502.1-201ENST00000399971 1502 ntBASIC22.08■■□□□ 1.13
TNFAIP6P98066 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNFAIP6P98066 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms