Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.62■■□□□ 1.69
PDX1P52945 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDX1P52945 LINC01971-201ENST00000617888 1048 ntBASIC25.62■■□□□ 1.69
PDX1P52945 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDX1P52945 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDX1P52945 CR559946.2-201ENST00000623684 991 ntBASIC25.61■■□□□ 1.69
PDX1P52945 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.61■■□□□ 1.69
PDX1P52945 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.61■■□□□ 1.69
PDX1P52945 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.6■■□□□ 1.69
PDX1P52945 DUX4L11-201ENST00000611504 1267 ntBASIC25.6■■□□□ 1.69
PDX1P52945 DUX4L12-201ENST00000614593 1267 ntBASIC25.6■■□□□ 1.69
PDX1P52945 DUX4L14-201ENST00000621227 1267 ntBASIC25.6■■□□□ 1.69
PDX1P52945 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDX1P52945 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PDX1P52945 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDX1P52945 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.59■■□□□ 1.69
PDX1P52945 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDX1P52945 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDX1P52945 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDX1P52945 AC120057.4-201ENST00000624722 1615 ntBASIC25.57■■□□□ 1.68
PDX1P52945 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.57■■□□□ 1.68
PDX1P52945 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDX1P52945 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
PDX1P52945 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PDX1P52945 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
PDX1P52945 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDX1P52945 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
PDX1P52945 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.54■■□□□ 1.68
PDX1P52945 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDX1P52945 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDX1P52945 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.53■■□□□ 1.68
PDX1P52945 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PDX1P52945 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.52■■□□□ 1.68
PDX1P52945 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDX1P52945 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDX1P52945 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.49■■□□□ 1.67
PDX1P52945 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDX1P52945 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PDX1P52945 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDX1P52945 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDX1P52945 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.48■■□□□ 1.67
PDX1P52945 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.48■■□□□ 1.67
PDX1P52945 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDX1P52945 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDX1P52945 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PDX1P52945 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PDX1P52945 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PDX1P52945 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PDX1P52945 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.45■■□□□ 1.66
PDX1P52945 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.45■■□□□ 1.66
PDX1P52945 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.44■■□□□ 1.66
PDX1P52945 HSD17B1P1-201ENST00000590052 955 ntBASIC25.44■■□□□ 1.66
PDX1P52945 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDX1P52945 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDX1P52945 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.43■■□□□ 1.66
PDX1P52945 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDX1P52945 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDX1P52945 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PDX1P52945 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.41■■□□□ 1.66
PDX1P52945 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
PDX1P52945 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
PDX1P52945 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PDX1P52945 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PDX1P52945 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDX1P52945 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.37■■□□□ 1.65
PDX1P52945 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PDX1P52945 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDX1P52945 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L13-201ENST00000554103 1267 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L15-201ENST00000611059 1267 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L23-201ENST00000615195 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L24-201ENST00000617576 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L22-201ENST00000618238 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L20-201ENST00000619712 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L21-201ENST00000622058 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L10-201ENST00000622460 1267 ntBASIC25.36■■□□□ 1.65
PDX1P52945 DUX4L25-201ENST00000624915 1269 ntBASIC25.36■■□□□ 1.65
PDX1P52945 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDX1P52945 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDX1P52945 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PDX1P52945 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDX1P52945 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.34■■□□□ 1.65
PDX1P52945 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.34■■□□□ 1.65
PDX1P52945 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
PDX1P52945 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.34■■□□□ 1.65
PDX1P52945 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.32■■□□□ 1.64
PDX1P52945 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PDX1P52945 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDX1P52945 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.31■■□□□ 1.64
PDX1P52945 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDX1P52945 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms