Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CXCL5P42830 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.51■□□□□ 0.39
CXCL5P42830 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CXCL5P42830 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCL5P42830 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.5■□□□□ 0.39
CXCL5P42830 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCL5P42830 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXCL5P42830 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCL5P42830 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL5P42830 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL5P42830 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL5P42830 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCL5P42830 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL5P42830 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL5P42830 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCL5P42830 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CXCL5P42830 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL5P42830 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL5P42830 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL5P42830 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL5P42830 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.46■□□□□ 0.39
CXCL5P42830 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.46■□□□□ 0.38
CXCL5P42830 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL5P42830 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CXCL5P42830 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL5P42830 AP002365.1-201ENST00000603448 772 ntBASIC17.45■□□□□ 0.38
CXCL5P42830 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL5P42830 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CXCL5P42830 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL5P42830 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL5P42830 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL5P42830 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCL5P42830 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL5P42830 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL5P42830 WASH5P-204ENST00000632292 975 ntBASIC17.43■□□□□ 0.38
CXCL5P42830 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL5P42830 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL5P42830 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CXCL5P42830 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL5P42830 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL5P42830 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CXCL5P42830 AL139393.2-201ENST00000608721 2025 ntBASIC17.42■□□□□ 0.38
CXCL5P42830 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL5P42830 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL5P42830 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCL5P42830 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.4■□□□□ 0.38
CXCL5P42830 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL5P42830 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCL5P42830 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL5P42830 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.39■□□□□ 0.38
CXCL5P42830 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL5P42830 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL5P42830 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL5P42830 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL5P42830 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCL5P42830 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CXCL5P42830 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCL5P42830 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCL5P42830 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCL5P42830 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CXCL5P42830 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.38■□□□□ 0.37
CXCL5P42830 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CXCL5P42830 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCL5P42830 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCL5P42830 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCL5P42830 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCL5P42830 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CXCL5P42830 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.37■□□□□ 0.37
CXCL5P42830 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCL5P42830 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CXCL5P42830 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL5P42830 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CXCL5P42830 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.36■□□□□ 0.37
CXCL5P42830 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CXCL5P42830 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXCL5P42830 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
CXCL5P42830 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXCL5P42830 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.34■□□□□ 0.37
CXCL5P42830 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL5P42830 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXCL5P42830 DRD5P2-201ENST00000421395 2012 ntBASIC17.33■□□□□ 0.36
CXCL5P42830 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXCL5P42830 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL5P42830 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL5P42830 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL5P42830 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXCL5P42830 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.31■□□□□ 0.36
CXCL5P42830 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.31■□□□□ 0.36
CXCL5P42830 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CXCL5P42830 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CXCL5P42830 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CXCL5P42830 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL5P42830 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CXCL5P42830 AC010864.1-201ENST00000609407 1511 ntBASIC17.3■□□□□ 0.36
CXCL5P42830 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CXCL5P42830 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL5P42830 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.29■□□□□ 0.36
CXCL5P42830 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CXCL5P42830 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.29■□□□□ 0.36
CXCL5P42830 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms