Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 CTI6YPL181W 1521 nt11.09□□□□□ -0.63
VPS27P40343 HEL2YDR266C 1920 nt11.08□□□□□ -0.64
VPS27P40343 ODC1YPL134C 933 nt11.08□□□□□ -0.64
VPS27P40343 ELO1YJL196C 933 nt11.07□□□□□ -0.64
VPS27P40343 IML3YBR107C 738 nt11.07□□□□□ -0.64
VPS27P40343 OPI3YJR073C 621 nt11.06□□□□□ -0.64
VPS27P40343 SSL2YIL143C 2532 nt11.06□□□□□ -0.64
VPS27P40343 BSP1YPR171W 1731 nt11.06□□□□□ -0.64
VPS27P40343 RPD3YNL330C 1302 nt11.06□□□□□ -0.64
VPS27P40343 SPS100YHR139C 981 nt11.04□□□□□ -0.64
VPS27P40343 YNR064CYNR064C 873 nt11.04□□□□□ -0.64
VPS27P40343 YLR349WYLR349W 507 nt11.03□□□□□ -0.64
VPS27P40343 VMA11YPL234C 495 nt11.03□□□□□ -0.64
VPS27P40343 TVP23YDR084C 600 nt11.01□□□□□ -0.65
VPS27P40343 TIM44YIL022W 1296 nt11.01□□□□□ -0.65
VPS27P40343 TAF13YML098W 504 nt11□□□□□ -0.65
VPS27P40343 RAD51YER095W 1203 nt10.99□□□□□ -0.65
VPS27P40343 MHF1YOL086W-A 273 nt10.99□□□□□ -0.65
VPS27P40343 SNX3YOR357C 489 nt10.99□□□□□ -0.65
VPS27P40343 CPD1YGR247W 720 nt10.98□□□□□ -0.65
VPS27P40343 DMA2YNL116W 1569 nt10.97□□□□□ -0.65
VPS27P40343 ABZ2YMR289W 1125 nt10.96□□□□□ -0.65
VPS27P40343 KEL3YPL263C 1956 nt10.94□□□□□ -0.66
VPS27P40343 ADH7YCR105W 1086 nt10.94□□□□□ -0.66
VPS27P40343 POT1YIL160C 1254 nt10.94□□□□□ -0.66
VPS27P40343 CWP2YKL096W-A 279 nt10.94□□□□□ -0.66
VPS27P40343 YMR262WYMR262W 942 nt10.94□□□□□ -0.66
VPS27P40343 ENO2YHR174W 1314 nt10.93□□□□□ -0.66
VPS27P40343 SUV3YPL029W 2214 nt10.93□□□□□ -0.66
VPS27P40343 YMR265CYMR265C 1386 nt10.92□□□□□ -0.66
VPS27P40343 PSD1YNL169C 1503 nt10.91□□□□□ -0.66
VPS27P40343 PAU15YIR041W 375 nt10.91□□□□□ -0.66
VPS27P40343 MDM35YKL053C-A 261 nt10.91□□□□□ -0.66
VPS27P40343 HAP5YOR358W 729 nt10.91□□□□□ -0.66
VPS27P40343 SFL1YOR140W 2301 nt10.9□□□□□ -0.66
VPS27P40343 RPC31YNL151C 756 nt10.88□□□□□ -0.67
VPS27P40343 AMF1YOR378W 1548 nt10.88□□□□□ -0.67
VPS27P40343 CYT1YOR065W 930 nt10.87□□□□□ -0.67
VPS27P40343 MET1YKR069W 1782 nt10.86□□□□□ -0.67
VPS27P40343 RPN14YGL004C 1254 nt10.86□□□□□ -0.67
VPS27P40343 TPC1YGR096W 945 nt10.85□□□□□ -0.67
VPS27P40343 CRC1YOR100C 984 nt10.85□□□□□ -0.67
VPS27P40343 PCP1YGR101W 1041 nt10.84□□□□□ -0.67
VPS27P40343 APS2YJR058C 444 nt10.84□□□□□ -0.67
VPS27P40343 SWT21YNL187W 1074 nt10.84□□□□□ -0.67
VPS27P40343 DPL1YDR294C 1770 nt10.83□□□□□ -0.68
VPS27P40343 RIM2YBR192W 1134 nt10.83□□□□□ -0.68
VPS27P40343 MAE1YKL029C 2010 nt10.83□□□□□ -0.68
VPS27P40343 NIF3YGL221C 867 nt10.82□□□□□ -0.68
VPS27P40343 YKL053WYKL053W 375 nt10.82□□□□□ -0.68
VPS27P40343 HXT10YFL011W 1641 nt10.82□□□□□ -0.68
VPS27P40343 snR31snR31 225 nt10.81□□□□□ -0.68
VPS27P40343 PAU5YFL020C 369 nt10.8□□□□□ -0.68
VPS27P40343 TUB4YLR212C 1422 nt10.79□□□□□ -0.68
VPS27P40343 GSF2YML048W 1212 nt10.79□□□□□ -0.68
VPS27P40343 KRE1YNL322C 942 nt10.79□□□□□ -0.68
VPS27P40343 YHR218WYHR218W 1812 nt10.79□□□□□ -0.68
VPS27P40343 KRR1YCL059C 951 nt10.78□□□□□ -0.68
VPS27P40343 SPE2YOL052C 1191 nt10.78□□□□□ -0.68
VPS27P40343 LEU4YNL104C 1860 nt10.76□□□□□ -0.69
VPS27P40343 KGD2YDR148C 1392 nt10.75□□□□□ -0.69
VPS27P40343 LEU2YCL018W 1095 nt10.74□□□□□ -0.69
VPS27P40343 ACO2YJL200C 2370 nt10.74□□□□□ -0.69
VPS27P40343 NAM8YHR086W 1572 nt10.73□□□□□ -0.69
VPS27P40343 tS(GCU)LtS(GCU)L 80 nt10.73□□□□□ -0.69
VPS27P40343 NAS2YIL007C 663 nt10.71□□□□□ -0.69
VPS27P40343 PGC1YPL206C 966 nt10.71□□□□□ -0.69
VPS27P40343 YDR467CYDR467C 327 nt10.7□□□□□ -0.7
VPS27P40343 AGP3YFL055W 1677 nt10.69□□□□□ -0.7
VPS27P40343 SAN1YDR143C 1833 nt10.68□□□□□ -0.7
VPS27P40343 ESS1YJR017C 513 nt10.67□□□□□ -0.7
VPS27P40343 SRP54YPR088C 1626 nt10.66□□□□□ -0.7
VPS27P40343 INH1YDL181W 258 nt10.66□□□□□ -0.7
VPS27P40343 STP3YLR375W 1032 nt10.66□□□□□ -0.7
VPS27P40343 THP3YPR045C 1413 nt10.64□□□□□ -0.71
VPS27P40343 NPP2YEL016C 1482 nt10.62□□□□□ -0.71
VPS27P40343 SBP1YHL034C 885 nt10.62□□□□□ -0.71
VPS27P40343 GPM1YKL152C 744 nt10.62□□□□□ -0.71
VPS27P40343 YKR012CYKR012C 378 nt10.62□□□□□ -0.71
VPS27P40343 REX2YLR059C 810 nt10.62□□□□□ -0.71
VPS27P40343 CDD1YLR245C 429 nt10.62□□□□□ -0.71
VPS27P40343 tE(CUC)DtE(CUC)D 72 nt10.6□□□□□ -0.71
VPS27P40343 tE(CUC)ItE(CUC)I 72 nt10.6□□□□□ -0.71
VPS27P40343 IGD1YFR017C 588 nt10.6□□□□□ -0.71
VPS27P40343 THI3YDL080C 1830 nt10.6□□□□□ -0.71
VPS27P40343 PAR32YDL173W 888 nt10.59□□□□□ -0.71
VPS27P40343 YBR232CYBR232C 360 nt10.58□□□□□ -0.72
VPS27P40343 YHL008CYHL008C 1884 nt10.57□□□□□ -0.72
VPS27P40343 GGA2YHR108W 1758 nt10.57□□□□□ -0.72
VPS27P40343 GID7YCL039W 2238 nt10.56□□□□□ -0.72
VPS27P40343 ADH3YMR083W 1128 nt10.56□□□□□ -0.72
VPS27P40343 FSH2YMR222C 672 nt10.56□□□□□ -0.72
VPS27P40343 PTC6YCR079W 1329 nt10.56□□□□□ -0.72
VPS27P40343 GAS1YMR307W 1680 nt10.55□□□□□ -0.72
VPS27P40343 YBL095WYBL095W 813 nt10.55□□□□□ -0.72
VPS27P40343 YMC2YBR104W 990 nt10.55□□□□□ -0.72
VPS27P40343 PHB2YGR231C 933 nt10.54□□□□□ -0.72
VPS27P40343 YMR316C-BYMR316C-B 309 nt10.53□□□□□ -0.72
VPS27P40343 SDS24YBR214W 1584 nt10.52□□□□□ -0.72
VPS27P40343 MOB1YIL106W 945 nt10.52□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms