Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
POLR3DP05423 AC021231.2-201ENST00000594613 730 ntBASIC31.55■■■□□ 2.64
POLR3DP05423 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
POLR3DP05423 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.54■■■□□ 2.64
POLR3DP05423 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.54■■■□□ 2.64
POLR3DP05423 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
POLR3DP05423 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.54■■■□□ 2.64
POLR3DP05423 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
POLR3DP05423 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.53■■■□□ 2.64
POLR3DP05423 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.53■■■□□ 2.64
POLR3DP05423 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
POLR3DP05423 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
POLR3DP05423 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
POLR3DP05423 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
POLR3DP05423 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
POLR3DP05423 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
POLR3DP05423 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.51■■■□□ 2.63
POLR3DP05423 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
POLR3DP05423 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
POLR3DP05423 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
POLR3DP05423 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
POLR3DP05423 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
POLR3DP05423 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
POLR3DP05423 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
POLR3DP05423 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
POLR3DP05423 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.47■■■□□ 2.63
POLR3DP05423 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
POLR3DP05423 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
POLR3DP05423 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.46■■■□□ 2.63
POLR3DP05423 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
POLR3DP05423 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.46■■■□□ 2.63
POLR3DP05423 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
POLR3DP05423 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.45■■■□□ 2.63
POLR3DP05423 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
POLR3DP05423 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
POLR3DP05423 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
POLR3DP05423 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
POLR3DP05423 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
POLR3DP05423 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
POLR3DP05423 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
POLR3DP05423 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
POLR3DP05423 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
POLR3DP05423 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
POLR3DP05423 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
POLR3DP05423 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
POLR3DP05423 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.38■■■□□ 2.61
POLR3DP05423 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
POLR3DP05423 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
POLR3DP05423 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.34■■■□□ 2.61
POLR3DP05423 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
POLR3DP05423 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.34■■■□□ 2.61
POLR3DP05423 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
POLR3DP05423 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
POLR3DP05423 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.31■■■□□ 2.6
POLR3DP05423 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.31■■■□□ 2.6
POLR3DP05423 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.3■■■□□ 2.6
POLR3DP05423 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
POLR3DP05423 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
POLR3DP05423 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
POLR3DP05423 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
POLR3DP05423 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
POLR3DP05423 AC010864.1-201ENST00000609407 1511 ntBASIC31.28■■■□□ 2.6
POLR3DP05423 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.27■■■□□ 2.6
POLR3DP05423 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
POLR3DP05423 HLA-V-202ENST00000446817 847 ntBASIC31.26■■■□□ 2.59
POLR3DP05423 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.26■■■□□ 2.59
POLR3DP05423 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
POLR3DP05423 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.24■■■□□ 2.59
POLR3DP05423 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
POLR3DP05423 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
POLR3DP05423 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
POLR3DP05423 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.23■■■□□ 2.59
POLR3DP05423 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
POLR3DP05423 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
POLR3DP05423 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
POLR3DP05423 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
POLR3DP05423 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.19■■■□□ 2.58
POLR3DP05423 LINC01971-201ENST00000617888 1048 ntBASIC31.19■■■□□ 2.58
POLR3DP05423 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
POLR3DP05423 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
POLR3DP05423 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
POLR3DP05423 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.18■■■□□ 2.58
POLR3DP05423 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
POLR3DP05423 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.16■■■□□ 2.58
POLR3DP05423 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
POLR3DP05423 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
POLR3DP05423 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.15■■■□□ 2.58
POLR3DP05423 DUX4L11-201ENST00000611504 1267 ntBASIC31.15■■■□□ 2.58
POLR3DP05423 DUX4L12-201ENST00000614593 1267 ntBASIC31.15■■■□□ 2.58
POLR3DP05423 DUX4L14-201ENST00000621227 1267 ntBASIC31.15■■■□□ 2.58
POLR3DP05423 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
POLR3DP05423 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
POLR3DP05423 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.14■■■□□ 2.58
POLR3DP05423 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.12■■■□□ 2.57
POLR3DP05423 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
POLR3DP05423 AL135925.1-201ENST00000605920 1701 ntBASIC31.11■■■□□ 2.57
POLR3DP05423 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.1■■■□□ 2.57
POLR3DP05423 ABCB10P1-201ENST00000614297 2181 ntBASIC31.1■■■□□ 2.57
POLR3DP05423 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.08■■■□□ 2.57
POLR3DP05423 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms