Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAMP3O60896 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RAMP3O60896 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAMP3O60896 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.42■■□□□ 1.02
RAMP3O60896 AL139393.2-201ENST00000608721 2025 ntBASIC21.41■■□□□ 1.02
RAMP3O60896 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.41■■□□□ 1.02
RAMP3O60896 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAMP3O60896 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAMP3O60896 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAMP3O60896 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAMP3O60896 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAMP3O60896 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAMP3O60896 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAMP3O60896 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
RAMP3O60896 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAMP3O60896 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.39■■□□□ 1.01
RAMP3O60896 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAMP3O60896 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAMP3O60896 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAMP3O60896 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAMP3O60896 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAMP3O60896 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAMP3O60896 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RAMP3O60896 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAMP3O60896 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAMP3O60896 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAMP3O60896 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAMP3O60896 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAMP3O60896 AC136428.2-201ENST00000563187 214 ntBASIC21.36■■□□□ 1.01
RAMP3O60896 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAMP3O60896 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAMP3O60896 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAMP3O60896 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAMP3O60896 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAMP3O60896 AC142086.6-201ENST00000621154 1765 ntBASIC21.35■■□□□ 1.01
RAMP3O60896 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RAMP3O60896 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.34■■□□□ 1.01
RAMP3O60896 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.34■■□□□ 1.01
RAMP3O60896 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAMP3O60896 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAMP3O60896 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.33■■□□□ 1
RAMP3O60896 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAMP3O60896 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.32■■□□□ 1
RAMP3O60896 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAMP3O60896 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAMP3O60896 AC010864.1-201ENST00000609407 1511 ntBASIC21.32■■□□□ 1
RAMP3O60896 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.31■■□□□ 1
RAMP3O60896 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAMP3O60896 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAMP3O60896 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAMP3O60896 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAMP3O60896 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RAMP3O60896 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAMP3O60896 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAMP3O60896 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAMP3O60896 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAMP3O60896 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAMP3O60896 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAMP3O60896 DRD5P2-201ENST00000421395 2012 ntBASIC21.28■■□□□ 1
RAMP3O60896 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAMP3O60896 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAMP3O60896 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RAMP3O60896 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RAMP3O60896 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
RAMP3O60896 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAMP3O60896 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.26■□□□□ 0.99
RAMP3O60896 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.26■□□□□ 0.99
RAMP3O60896 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAMP3O60896 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAMP3O60896 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.25■□□□□ 0.99
RAMP3O60896 SUZ12P1-203ENST00000578195 985 ntBASIC21.25■□□□□ 0.99
RAMP3O60896 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAMP3O60896 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAMP3O60896 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAMP3O60896 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.24■□□□□ 0.99
RAMP3O60896 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAMP3O60896 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.23■□□□□ 0.99
RAMP3O60896 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.23■□□□□ 0.99
RAMP3O60896 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAMP3O60896 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.23■□□□□ 0.99
RAMP3O60896 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
RAMP3O60896 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAMP3O60896 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAMP3O60896 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.22■□□□□ 0.99
RAMP3O60896 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.22■□□□□ 0.99
RAMP3O60896 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
RAMP3O60896 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAMP3O60896 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAMP3O60896 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAMP3O60896 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RAMP3O60896 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAMP3O60896 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RAMP3O60896 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAMP3O60896 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAMP3O60896 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAMP3O60896 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RAMP3O60896 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAMP3O60896 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.18■□□□□ 0.98
RAMP3O60896 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAMP3O60896 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms