Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.33■■□□□ 1.49
HCN1O60741 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HCN1O60741 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.33■■□□□ 1.48
HCN1O60741 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.32■■□□□ 1.48
HCN1O60741 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HCN1O60741 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
HCN1O60741 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HCN1O60741 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HCN1O60741 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HCN1O60741 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HCN1O60741 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
HCN1O60741 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
HCN1O60741 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HCN1O60741 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HCN1O60741 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
HCN1O60741 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
HCN1O60741 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
HCN1O60741 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
HCN1O60741 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HCN1O60741 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
HCN1O60741 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
HCN1O60741 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
HCN1O60741 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
HCN1O60741 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
HCN1O60741 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
HCN1O60741 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
HCN1O60741 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
HCN1O60741 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.25■■□□□ 1.47
HCN1O60741 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.25■■□□□ 1.47
HCN1O60741 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
HCN1O60741 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
HCN1O60741 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HCN1O60741 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HCN1O60741 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HCN1O60741 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.24■■□□□ 1.47
HCN1O60741 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.24■■□□□ 1.47
HCN1O60741 ST7-AS1-201ENST00000456775 1889 ntBASIC24.24■■□□□ 1.47
HCN1O60741 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HCN1O60741 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
HCN1O60741 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.23■■□□□ 1.47
HCN1O60741 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
HCN1O60741 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HCN1O60741 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HCN1O60741 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HCN1O60741 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
HCN1O60741 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.22■■□□□ 1.47
HCN1O60741 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.22■■□□□ 1.47
HCN1O60741 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HCN1O60741 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.21■■□□□ 1.47
HCN1O60741 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HCN1O60741 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
HCN1O60741 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HCN1O60741 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
HCN1O60741 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
HCN1O60741 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
HCN1O60741 ABHD17AP4-201ENST00000411545 909 ntBASIC24.19■■□□□ 1.46
HCN1O60741 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
HCN1O60741 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
HCN1O60741 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
HCN1O60741 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
HCN1O60741 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
HCN1O60741 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.16■■□□□ 1.46
HCN1O60741 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC24.16■■□□□ 1.46
HCN1O60741 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
HCN1O60741 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HCN1O60741 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HCN1O60741 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
HCN1O60741 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HCN1O60741 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.14■■□□□ 1.45
HCN1O60741 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
HCN1O60741 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
HCN1O60741 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HCN1O60741 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HCN1O60741 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HCN1O60741 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.12■■□□□ 1.45
HCN1O60741 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HCN1O60741 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.12■■□□□ 1.45
HCN1O60741 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HCN1O60741 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HCN1O60741 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.11■■□□□ 1.45
HCN1O60741 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.11■■□□□ 1.45
HCN1O60741 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.11■■□□□ 1.45
HCN1O60741 AL135925.1-201ENST00000605920 1701 ntBASIC24.1■■□□□ 1.45
HCN1O60741 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HCN1O60741 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.1■■□□□ 1.45
HCN1O60741 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
HCN1O60741 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
HCN1O60741 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.1■■□□□ 1.45
HCN1O60741 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCN1O60741 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
HCN1O60741 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
HCN1O60741 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HCN1O60741 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
HCN1O60741 AC139426.1-201ENST00000568218 2529 ntBASIC24.09■■□□□ 1.45
HCN1O60741 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
HCN1O60741 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
HCN1O60741 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
HCN1O60741 AC108673.1-201ENST00000510422 1159 ntBASIC24.08■■□□□ 1.45
HCN1O60741 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
HCN1O60741 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms