Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
KCNQ2O43526 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC34.9■■■■□ 3.18
KCNQ2O43526 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
KCNQ2O43526 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
KCNQ2O43526 SRP68-213ENST00000629930 165 ntTSL 5 BASIC34.88■■■■□ 3.17
KCNQ2O43526 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC34.88■■■■□ 3.17
KCNQ2O43526 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
KCNQ2O43526 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC34.87■■■■□ 3.17
KCNQ2O43526 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC34.85■■■■□ 3.17
KCNQ2O43526 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
KCNQ2O43526 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC34.84■■■■□ 3.17
KCNQ2O43526 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.83■■■■□ 3.17
KCNQ2O43526 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC34.83■■■■□ 3.17
KCNQ2O43526 CHML-204ENST00000638121 920 ntTSL 2 BASIC34.81■■■■□ 3.16
KCNQ2O43526 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
KCNQ2O43526 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
KCNQ2O43526 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
KCNQ2O43526 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
KCNQ2O43526 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
KCNQ2O43526 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
KCNQ2O43526 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
KCNQ2O43526 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
KCNQ2O43526 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC34.77■■■■□ 3.16
KCNQ2O43526 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.16
KCNQ2O43526 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
KCNQ2O43526 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.15
KCNQ2O43526 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
KCNQ2O43526 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC34.73■■■■□ 3.15
KCNQ2O43526 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
KCNQ2O43526 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
KCNQ2O43526 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC34.71■■■■□ 3.15
KCNQ2O43526 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
KCNQ2O43526 GPX1-201ENST00000419349 1106 ntBASIC34.69■■■■□ 3.14
KCNQ2O43526 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC34.67■■■■□ 3.14
KCNQ2O43526 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
KCNQ2O43526 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
KCNQ2O43526 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
KCNQ2O43526 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
KCNQ2O43526 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
KCNQ2O43526 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
KCNQ2O43526 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
KCNQ2O43526 EI24-212ENST00000615917 1407 ntTSL 2 BASIC34.64■■■■□ 3.14
KCNQ2O43526 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC34.64■■■■□ 3.14
KCNQ2O43526 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC34.63■■■■□ 3.13
KCNQ2O43526 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC34.62■■■■□ 3.13
KCNQ2O43526 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC34.62■■■■□ 3.13
KCNQ2O43526 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
KCNQ2O43526 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC34.61■■■■□ 3.13
KCNQ2O43526 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
KCNQ2O43526 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
KCNQ2O43526 RNF126P1-201ENST00000567452 1320 ntBASIC34.6■■■■□ 3.13
KCNQ2O43526 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC34.6■■■■□ 3.13
KCNQ2O43526 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
KCNQ2O43526 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC34.58■■■■□ 3.13
KCNQ2O43526 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC34.57■■■■□ 3.13
KCNQ2O43526 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC34.57■■■■□ 3.12
KCNQ2O43526 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC34.57■■■■□ 3.12
KCNQ2O43526 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC34.56■■■■□ 3.12
KCNQ2O43526 CHST11-202ENST00000546689 756 ntTSL 2 BASIC34.55■■■■□ 3.12
KCNQ2O43526 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
KCNQ2O43526 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC34.54■■■■□ 3.12
KCNQ2O43526 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
KCNQ2O43526 TPT1-202ENST00000379055 948 ntTSL 2 BASIC34.53■■■■□ 3.12
KCNQ2O43526 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC34.53■■■■□ 3.12
KCNQ2O43526 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
KCNQ2O43526 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
KCNQ2O43526 AC012354.3-201ENST00000623734 483 ntBASIC34.52■■■■□ 3.12
KCNQ2O43526 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC34.5■■■■□ 3.11
KCNQ2O43526 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
KCNQ2O43526 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
KCNQ2O43526 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
KCNQ2O43526 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
KCNQ2O43526 CEP120-209ENST00000515110 606 ntTSL 3 BASIC34.47■■■■□ 3.11
KCNQ2O43526 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC34.46■■■■□ 3.11
KCNQ2O43526 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
KCNQ2O43526 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
KCNQ2O43526 NTF6A-201ENST00000591175 560 ntBASIC34.44■■■■□ 3.1
KCNQ2O43526 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
KCNQ2O43526 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC34.43■■■■□ 3.1
KCNQ2O43526 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
KCNQ2O43526 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC34.42■■■■□ 3.1
KCNQ2O43526 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
KCNQ2O43526 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
KCNQ2O43526 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC34.41■■■■□ 3.1
KCNQ2O43526 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC34.4■■■■□ 3.1
KCNQ2O43526 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC34.39■■■■□ 3.1
KCNQ2O43526 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC34.39■■■■□ 3.1
KCNQ2O43526 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
KCNQ2O43526 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
KCNQ2O43526 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC34.37■■■■□ 3.09
KCNQ2O43526 AC018358.1-201ENST00000631079 1402 ntBASIC34.37■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms