Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
FOXN1O15353 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.7■■■□□ 2.67
FOXN1O15353 AC018358.1-201ENST00000631079 1402 ntBASIC31.7■■■□□ 2.67
FOXN1O15353 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
FOXN1O15353 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
FOXN1O15353 GPX1-201ENST00000419349 1106 ntBASIC31.7■■■□□ 2.67
FOXN1O15353 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
FOXN1O15353 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
FOXN1O15353 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.66
FOXN1O15353 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
FOXN1O15353 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.69■■■□□ 2.66
FOXN1O15353 RNF126P1-201ENST00000567452 1320 ntBASIC31.69■■■□□ 2.66
FOXN1O15353 NTF6A-201ENST00000591175 560 ntBASIC31.68■■■□□ 2.66
FOXN1O15353 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.66■■■□□ 2.66
FOXN1O15353 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
FOXN1O15353 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
FOXN1O15353 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.65■■■□□ 2.66
FOXN1O15353 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
FOXN1O15353 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
FOXN1O15353 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
FOXN1O15353 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
FOXN1O15353 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
FOXN1O15353 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.62■■■□□ 2.65
FOXN1O15353 AC019069.1-201ENST00000610008 1333 ntBASIC31.62■■■□□ 2.65
FOXN1O15353 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
FOXN1O15353 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
FOXN1O15353 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.61■■■□□ 2.65
FOXN1O15353 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
FOXN1O15353 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
FOXN1O15353 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.6■■■□□ 2.65
FOXN1O15353 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
FOXN1O15353 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
FOXN1O15353 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
FOXN1O15353 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.58■■■□□ 2.65
FOXN1O15353 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.58■■■□□ 2.65
FOXN1O15353 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
FOXN1O15353 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L13-201ENST00000554103 1267 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L15-201ENST00000611059 1267 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L23-201ENST00000615195 1269 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L24-201ENST00000617576 1269 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L22-201ENST00000618238 1269 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L20-201ENST00000619712 1269 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L21-201ENST00000622058 1269 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L10-201ENST00000622460 1267 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 DUX4L25-201ENST00000624915 1269 ntBASIC31.56■■■□□ 2.64
FOXN1O15353 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.55■■■□□ 2.64
FOXN1O15353 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.55■■■□□ 2.64
FOXN1O15353 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
FOXN1O15353 AL033527.3-201ENST00000566366 1196 ntBASIC31.54■■■□□ 2.64
FOXN1O15353 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
FOXN1O15353 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC31.52■■■□□ 2.64
FOXN1O15353 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.51■■■□□ 2.63
FOXN1O15353 AC008813.1-201ENST00000536597 885 ntBASIC31.51■■■□□ 2.63
FOXN1O15353 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
FOXN1O15353 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
FOXN1O15353 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
FOXN1O15353 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.48■■■□□ 2.63
FOXN1O15353 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
FOXN1O15353 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
FOXN1O15353 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
FOXN1O15353 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
FOXN1O15353 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.46■■■□□ 2.63
FOXN1O15353 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.46■■■□□ 2.63
FOXN1O15353 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
FOXN1O15353 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
FOXN1O15353 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
FOXN1O15353 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
FOXN1O15353 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.45■■■□□ 2.63
FOXN1O15353 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
FOXN1O15353 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
FOXN1O15353 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
FOXN1O15353 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
FOXN1O15353 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
FOXN1O15353 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.43■■■□□ 2.62
FOXN1O15353 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
FOXN1O15353 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.42■■■□□ 2.62
FOXN1O15353 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
FOXN1O15353 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
FOXN1O15353 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
FOXN1O15353 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.41■■■□□ 2.62
FOXN1O15353 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
FOXN1O15353 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
FOXN1O15353 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
FOXN1O15353 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
FOXN1O15353 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
FOXN1O15353 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
FOXN1O15353 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.38■■■□□ 2.61
FOXN1O15353 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.38■■■□□ 2.61
FOXN1O15353 AL592295.1-201ENST00000400984 884 ntBASIC31.37■■■□□ 2.61
FOXN1O15353 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.36■■■□□ 2.61
FOXN1O15353 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms