Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
PCDH17O14917 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PCDH17O14917 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
PCDH17O14917 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDH17O14917 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDH17O14917 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.96■■□□□ 1.59
PCDH17O14917 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.96■■□□□ 1.59
PCDH17O14917 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH17O14917 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH17O14917 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH17O14917 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
PCDH17O14917 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDH17O14917 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH17O14917 AC108673.1-201ENST00000510422 1159 ntBASIC24.94■■□□□ 1.58
PCDH17O14917 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH17O14917 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDH17O14917 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH17O14917 AC139426.1-201ENST00000568218 2529 ntBASIC24.92■■□□□ 1.58
PCDH17O14917 ABHD17AP4-201ENST00000411545 909 ntBASIC24.92■■□□□ 1.58
PCDH17O14917 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.92■■□□□ 1.58
PCDH17O14917 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
PCDH17O14917 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH17O14917 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH17O14917 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PCDH17O14917 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH17O14917 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDH17O14917 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDH17O14917 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDH17O14917 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH17O14917 MIR7108-201ENST00000614319 87 ntBASIC24.88■■□□□ 1.57
PCDH17O14917 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH17O14917 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH17O14917 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH17O14917 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDH17O14917 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH17O14917 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH17O14917 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH17O14917 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.86■■□□□ 1.57
PCDH17O14917 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDH17O14917 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.86■■□□□ 1.57
PCDH17O14917 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.86■■□□□ 1.57
PCDH17O14917 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.86■■□□□ 1.57
PCDH17O14917 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH17O14917 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDH17O14917 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH17O14917 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDH17O14917 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
PCDH17O14917 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH17O14917 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDH17O14917 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
PCDH17O14917 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH17O14917 DUX4L29-201ENST00000425409 679 ntBASIC24.82■■□□□ 1.56
PCDH17O14917 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
PCDH17O14917 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
PCDH17O14917 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH17O14917 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH17O14917 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDH17O14917 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.81■■□□□ 1.56
PCDH17O14917 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH17O14917 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH17O14917 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDH17O14917 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.79■■□□□ 1.56
PCDH17O14917 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH17O14917 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH17O14917 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDH17O14917 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH17O14917 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH17O14917 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
PCDH17O14917 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
PCDH17O14917 AL161658.1-201ENST00000623641 1967 ntBASIC24.77■■□□□ 1.56
PCDH17O14917 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH17O14917 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDH17O14917 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH17O14917 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDH17O14917 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH17O14917 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH17O14917 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDH17O14917 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDH17O14917 ST7-AS1-201ENST00000456775 1889 ntBASIC24.76■■□□□ 1.55
PCDH17O14917 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
PCDH17O14917 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH17O14917 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.75■■□□□ 1.55
PCDH17O14917 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDH17O14917 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDH17O14917 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PCDH17O14917 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH17O14917 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDH17O14917 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
PCDH17O14917 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDH17O14917 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.73■■□□□ 1.55
PCDH17O14917 MIR6090-201ENST00000622481 60 ntBASIC24.73■■□□□ 1.55
PCDH17O14917 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH17O14917 ZNRF2P2-203ENST00000454624 420 ntBASIC24.72■■□□□ 1.55
PCDH17O14917 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDH17O14917 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH17O14917 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH17O14917 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH17O14917 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.71■■□□□ 1.55
PCDH17O14917 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH17O14917 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms