Protein–RNA interactions for Protein: A7E2V4

ZSWIM8, Zinc finger SWIM domain-containing protein 8, humanhuman

Predictions only

Length 1,837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8A7E2V4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ZSWIM8A7E2V4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ZSWIM8A7E2V4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
ZSWIM8A7E2V4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ZSWIM8A7E2V4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.66■■■□□ 2.5
ZSWIM8A7E2V4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ZSWIM8A7E2V4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
ZSWIM8A7E2V4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ZSWIM8A7E2V4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.65■■■□□ 2.5
ZSWIM8A7E2V4 ABHD17AP5-201ENST00000580133 923 ntBASIC30.65■■■□□ 2.5
ZSWIM8A7E2V4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
ZSWIM8A7E2V4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
ZSWIM8A7E2V4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.63■■■□□ 2.49
ZSWIM8A7E2V4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
ZSWIM8A7E2V4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
ZSWIM8A7E2V4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
ZSWIM8A7E2V4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZSWIM8A7E2V4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ZSWIM8A7E2V4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ZSWIM8A7E2V4 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.58■■■□□ 2.49
ZSWIM8A7E2V4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.55■■■□□ 2.48
ZSWIM8A7E2V4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.54■■■□□ 2.48
ZSWIM8A7E2V4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ZSWIM8A7E2V4 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.53■■■□□ 2.48
ZSWIM8A7E2V4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
ZSWIM8A7E2V4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
ZSWIM8A7E2V4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
ZSWIM8A7E2V4 GPX1-201ENST00000419349 1106 ntBASIC30.52■■■□□ 2.48
ZSWIM8A7E2V4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ZSWIM8A7E2V4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.51■■■□□ 2.47
ZSWIM8A7E2V4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
ZSWIM8A7E2V4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
ZSWIM8A7E2V4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
ZSWIM8A7E2V4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
ZSWIM8A7E2V4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ZSWIM8A7E2V4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.47■■■□□ 2.47
ZSWIM8A7E2V4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ZSWIM8A7E2V4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
ZSWIM8A7E2V4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.46■■■□□ 2.47
ZSWIM8A7E2V4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZSWIM8A7E2V4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
ZSWIM8A7E2V4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.44■■■□□ 2.46
ZSWIM8A7E2V4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.43■■■□□ 2.46
ZSWIM8A7E2V4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
ZSWIM8A7E2V4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.43■■■□□ 2.46
ZSWIM8A7E2V4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
ZSWIM8A7E2V4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
ZSWIM8A7E2V4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ZSWIM8A7E2V4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ZSWIM8A7E2V4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
ZSWIM8A7E2V4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.39■■■□□ 2.46
ZSWIM8A7E2V4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.39■■■□□ 2.46
ZSWIM8A7E2V4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.39■■■□□ 2.45
ZSWIM8A7E2V4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.38■■■□□ 2.45
ZSWIM8A7E2V4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.38■■■□□ 2.45
ZSWIM8A7E2V4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.38■■■□□ 2.45
ZSWIM8A7E2V4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
ZSWIM8A7E2V4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.37■■■□□ 2.45
ZSWIM8A7E2V4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZSWIM8A7E2V4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
ZSWIM8A7E2V4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZSWIM8A7E2V4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ZSWIM8A7E2V4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
ZSWIM8A7E2V4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ZSWIM8A7E2V4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
ZSWIM8A7E2V4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ZSWIM8A7E2V4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.35■■■□□ 2.45
ZSWIM8A7E2V4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
ZSWIM8A7E2V4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ZSWIM8A7E2V4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.32■■■□□ 2.44
ZSWIM8A7E2V4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
ZSWIM8A7E2V4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ZSWIM8A7E2V4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.31■■■□□ 2.44
ZSWIM8A7E2V4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
ZSWIM8A7E2V4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.31■■■□□ 2.44
ZSWIM8A7E2V4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ZSWIM8A7E2V4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ZSWIM8A7E2V4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ZSWIM8A7E2V4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
ZSWIM8A7E2V4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
ZSWIM8A7E2V4 AC012354.3-201ENST00000623734 483 ntBASIC30.28■■■□□ 2.44
ZSWIM8A7E2V4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
ZSWIM8A7E2V4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.27■■■□□ 2.44
ZSWIM8A7E2V4 NTF6A-201ENST00000591175 560 ntBASIC30.26■■■□□ 2.44
ZSWIM8A7E2V4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.26■■■□□ 2.43
ZSWIM8A7E2V4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
ZSWIM8A7E2V4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.24■■■□□ 2.43
ZSWIM8A7E2V4 RNF126P1-201ENST00000567452 1320 ntBASIC30.24■■■□□ 2.43
ZSWIM8A7E2V4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.24■■■□□ 2.43
ZSWIM8A7E2V4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ZSWIM8A7E2V4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZSWIM8A7E2V4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms