Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TBC1D3FA6NER0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TBC1D3FA6NER0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TBC1D3FA6NER0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.39■■□□□ 1.82
TBC1D3FA6NER0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TBC1D3FA6NER0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.37■■□□□ 1.81
TBC1D3FA6NER0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TBC1D3FA6NER0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.37■■□□□ 1.81
TBC1D3FA6NER0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TBC1D3FA6NER0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TBC1D3FA6NER0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.36■■□□□ 1.81
TBC1D3FA6NER0 LINC01971-201ENST00000617888 1048 ntBASIC26.36■■□□□ 1.81
TBC1D3FA6NER0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.35■■□□□ 1.81
TBC1D3FA6NER0 DUX4L11-201ENST00000611504 1267 ntBASIC26.35■■□□□ 1.81
TBC1D3FA6NER0 DUX4L12-201ENST00000614593 1267 ntBASIC26.35■■□□□ 1.81
TBC1D3FA6NER0 DUX4L14-201ENST00000621227 1267 ntBASIC26.35■■□□□ 1.81
TBC1D3FA6NER0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TBC1D3FA6NER0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.32■■□□□ 1.8
TBC1D3FA6NER0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TBC1D3FA6NER0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.32■■□□□ 1.8
TBC1D3FA6NER0 MIR3648-2-201ENST00000581792 180 ntBASIC26.32■■□□□ 1.8
TBC1D3FA6NER0 MIR3648-1-201ENST00000615959 180 ntBASIC26.32■■□□□ 1.8
TBC1D3FA6NER0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.32■■□□□ 1.8
TBC1D3FA6NER0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
TBC1D3FA6NER0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TBC1D3FA6NER0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.31■■□□□ 1.8
TBC1D3FA6NER0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.31■■□□□ 1.8
TBC1D3FA6NER0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.31■■□□□ 1.8
TBC1D3FA6NER0 AC016575.1-201ENST00000607026 382 ntBASIC26.3■■□□□ 1.8
TBC1D3FA6NER0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TBC1D3FA6NER0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.29■■□□□ 1.8
TBC1D3FA6NER0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.29■■□□□ 1.8
TBC1D3FA6NER0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TBC1D3FA6NER0 MIR639-201ENST00000384974 98 ntBASIC26.28■■□□□ 1.8
TBC1D3FA6NER0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.28■■□□□ 1.8
TBC1D3FA6NER0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TBC1D3FA6NER0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.27■■□□□ 1.8
TBC1D3FA6NER0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TBC1D3FA6NER0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TBC1D3FA6NER0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TBC1D3FA6NER0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TBC1D3FA6NER0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
TBC1D3FA6NER0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.24■■□□□ 1.79
TBC1D3FA6NER0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TBC1D3FA6NER0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TBC1D3FA6NER0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.22■■□□□ 1.79
TBC1D3FA6NER0 MIR4449-201ENST00000578365 66 ntBASIC26.22■■□□□ 1.79
TBC1D3FA6NER0 CR559946.2-201ENST00000623684 991 ntBASIC26.22■■□□□ 1.79
TBC1D3FA6NER0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TBC1D3FA6NER0 AC010864.1-201ENST00000609407 1511 ntBASIC26.22■■□□□ 1.79
TBC1D3FA6NER0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
TBC1D3FA6NER0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.21■■□□□ 1.79
TBC1D3FA6NER0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
TBC1D3FA6NER0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.19■■□□□ 1.78
TBC1D3FA6NER0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TBC1D3FA6NER0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TBC1D3FA6NER0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
TBC1D3FA6NER0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TBC1D3FA6NER0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TBC1D3FA6NER0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TBC1D3FA6NER0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.17■■□□□ 1.78
TBC1D3FA6NER0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TBC1D3FA6NER0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TBC1D3FA6NER0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
TBC1D3FA6NER0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TBC1D3FA6NER0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TBC1D3FA6NER0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TBC1D3FA6NER0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
TBC1D3FA6NER0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TBC1D3FA6NER0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L13-201ENST00000554103 1267 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L15-201ENST00000611059 1267 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L23-201ENST00000615195 1269 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L24-201ENST00000617576 1269 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L22-201ENST00000618238 1269 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L20-201ENST00000619712 1269 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L21-201ENST00000622058 1269 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L10-201ENST00000622460 1267 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 DUX4L25-201ENST00000624915 1269 ntBASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TBC1D3FA6NER0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.14■■□□□ 1.77
TBC1D3FA6NER0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TBC1D3FA6NER0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
TBC1D3FA6NER0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TBC1D3FA6NER0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TBC1D3FA6NER0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.13■■□□□ 1.77
TBC1D3FA6NER0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
TBC1D3FA6NER0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TBC1D3FA6NER0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TBC1D3FA6NER0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TBC1D3FA6NER0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TBC1D3FA6NER0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TBC1D3FA6NER0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.11■■□□□ 1.77
TBC1D3FA6NER0 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.1■■□□□ 1.77
TBC1D3FA6NER0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.1■■□□□ 1.77
TBC1D3FA6NER0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TBC1D3FA6NER0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
TBC1D3FA6NER0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TBC1D3FA6NER0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms