Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
HFM1A2PYH4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
HFM1A2PYH4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC39.51■■■■□ 3.92
HFM1A2PYH4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC39.51■■■■□ 3.92
HFM1A2PYH4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
HFM1A2PYH4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC39.49■■■■□ 3.91
HFM1A2PYH4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC39.49■■■■□ 3.91
HFM1A2PYH4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC39.49■■■■□ 3.91
HFM1A2PYH4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC39.49■■■■□ 3.91
HFM1A2PYH4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
HFM1A2PYH4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
HFM1A2PYH4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
HFM1A2PYH4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC39.47■■■■□ 3.91
HFM1A2PYH4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
HFM1A2PYH4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC39.47■■■■□ 3.91
HFM1A2PYH4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
HFM1A2PYH4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
HFM1A2PYH4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC39.46■■■■□ 3.91
HFM1A2PYH4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC39.45■■■■□ 3.91
HFM1A2PYH4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC39.45■■■■□ 3.91
HFM1A2PYH4 AC021231.2-201ENST00000594613 730 ntBASIC39.44■■■■□ 3.9
HFM1A2PYH4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC39.43■■■■□ 3.9
HFM1A2PYH4 ABHD17AP4-201ENST00000411545 909 ntBASIC39.43■■■■□ 3.9
HFM1A2PYH4 AL135925.1-201ENST00000605920 1701 ntBASIC39.42■■■■□ 3.9
HFM1A2PYH4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
HFM1A2PYH4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.4■■■■□ 3.9
HFM1A2PYH4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
HFM1A2PYH4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
HFM1A2PYH4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC39.4■■■■□ 3.9
HFM1A2PYH4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC39.39■■■■□ 3.9
HFM1A2PYH4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC39.38■■■■□ 3.89
HFM1A2PYH4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.37■■■■□ 3.89
HFM1A2PYH4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
HFM1A2PYH4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
HFM1A2PYH4 DUX4L29-201ENST00000425409 679 ntBASIC39.37■■■■□ 3.89
HFM1A2PYH4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
HFM1A2PYH4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
HFM1A2PYH4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC39.36■■■■□ 3.89
HFM1A2PYH4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC39.34■■■■□ 3.89
HFM1A2PYH4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
HFM1A2PYH4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
HFM1A2PYH4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC39.28■■■■□ 3.88
HFM1A2PYH4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
HFM1A2PYH4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
HFM1A2PYH4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
HFM1A2PYH4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC39.27■■■■□ 3.88
HFM1A2PYH4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC39.27■■■■□ 3.88
HFM1A2PYH4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC39.27■■■■□ 3.88
HFM1A2PYH4 ZNRF2P2-203ENST00000454624 420 ntBASIC39.26■■■■□ 3.88
HFM1A2PYH4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC39.25■■■■□ 3.87
HFM1A2PYH4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
HFM1A2PYH4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
HFM1A2PYH4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
HFM1A2PYH4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC39.23■■■■□ 3.87
HFM1A2PYH4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC39.23■■■■□ 3.87
HFM1A2PYH4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC39.23■■■■□ 3.87
HFM1A2PYH4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC39.23■■■■□ 3.87
HFM1A2PYH4 MIR7108-201ENST00000614319 87 ntBASIC39.22■■■■□ 3.87
HFM1A2PYH4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
HFM1A2PYH4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC39.2■■■■□ 3.87
HFM1A2PYH4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC39.18■■■■□ 3.86
HFM1A2PYH4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC39.17■■■■□ 3.86
HFM1A2PYH4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC39.17■■■■□ 3.86
HFM1A2PYH4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC39.17■■■■□ 3.86
HFM1A2PYH4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
HFM1A2PYH4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
HFM1A2PYH4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC39.15■■■■□ 3.86
HFM1A2PYH4 ST7-AS1-201ENST00000456775 1889 ntBASIC39.15■■■■□ 3.86
HFM1A2PYH4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC39.15■■■■□ 3.86
HFM1A2PYH4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC39.15■■■■□ 3.86
HFM1A2PYH4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
HFM1A2PYH4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC39.14■■■■□ 3.86
HFM1A2PYH4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
HFM1A2PYH4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC39.14■■■■□ 3.86
HFM1A2PYH4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
HFM1A2PYH4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC39.13■■■■□ 3.85
HFM1A2PYH4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
HFM1A2PYH4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC39.12■■■■□ 3.85
HFM1A2PYH4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
HFM1A2PYH4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC39.11■■■■□ 3.85
HFM1A2PYH4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC39.11■■■■□ 3.85
HFM1A2PYH4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
HFM1A2PYH4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC39.09■■■■□ 3.85
HFM1A2PYH4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
HFM1A2PYH4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
HFM1A2PYH4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC39.08■■■■□ 3.85
HFM1A2PYH4 LINC00273-201ENST00000539813 1452 ntBASIC39.07■■■■□ 3.85
HFM1A2PYH4 AC127502.1-201ENST00000399971 1502 ntBASIC39.07■■■■□ 3.85
HFM1A2PYH4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC39.06■■■■□ 3.84
HFM1A2PYH4 LINC01971-201ENST00000617888 1048 ntBASIC39.06■■■■□ 3.84
HFM1A2PYH4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC39.06■■■■□ 3.84
HFM1A2PYH4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
HFM1A2PYH4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
HFM1A2PYH4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC39.06■■■■□ 3.84
HFM1A2PYH4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
HFM1A2PYH4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
HFM1A2PYH4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC39.05■■■■□ 3.84
HFM1A2PYH4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.05■■■■□ 3.84
HFM1A2PYH4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
HFM1A2PYH4 ST7-202ENST00000323984 2142 ntTSL 5 BASIC39.01■■■■□ 3.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms