Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TCRBV9S1A1TA0A576 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TCRBV9S1A1TA0A576 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TCRBV9S1A1TA0A576 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.51■■□□□ 1.83
TCRBV9S1A1TA0A576 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
TCRBV9S1A1TA0A576 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TCRBV9S1A1TA0A576 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.48■■□□□ 1.83
TCRBV9S1A1TA0A576 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TCRBV9S1A1TA0A576 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TCRBV9S1A1TA0A576 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TCRBV9S1A1TA0A576 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TCRBV9S1A1TA0A576 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
TCRBV9S1A1TA0A576 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
TCRBV9S1A1TA0A576 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.45■■□□□ 1.82
TCRBV9S1A1TA0A576 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.45■■□□□ 1.82
TCRBV9S1A1TA0A576 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.45■■□□□ 1.82
TCRBV9S1A1TA0A576 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
TCRBV9S1A1TA0A576 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.44■■□□□ 1.82
TCRBV9S1A1TA0A576 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
TCRBV9S1A1TA0A576 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TCRBV9S1A1TA0A576 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TCRBV9S1A1TA0A576 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TCRBV9S1A1TA0A576 AC010864.1-201ENST00000609407 1511 ntBASIC26.44■■□□□ 1.82
TCRBV9S1A1TA0A576 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TCRBV9S1A1TA0A576 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
TCRBV9S1A1TA0A576 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TCRBV9S1A1TA0A576 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TCRBV9S1A1TA0A576 DRD5P2-201ENST00000421395 2012 ntBASIC26.41■■□□□ 1.82
TCRBV9S1A1TA0A576 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TCRBV9S1A1TA0A576 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TCRBV9S1A1TA0A576 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TCRBV9S1A1TA0A576 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.38■■□□□ 1.81
TCRBV9S1A1TA0A576 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TCRBV9S1A1TA0A576 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TCRBV9S1A1TA0A576 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TCRBV9S1A1TA0A576 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.36■■□□□ 1.81
TCRBV9S1A1TA0A576 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.36■■□□□ 1.81
TCRBV9S1A1TA0A576 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TCRBV9S1A1TA0A576 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TCRBV9S1A1TA0A576 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
TCRBV9S1A1TA0A576 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TCRBV9S1A1TA0A576 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TCRBV9S1A1TA0A576 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.34■■□□□ 1.81
TCRBV9S1A1TA0A576 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
TCRBV9S1A1TA0A576 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TCRBV9S1A1TA0A576 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TCRBV9S1A1TA0A576 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.33■■□□□ 1.81
TCRBV9S1A1TA0A576 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TCRBV9S1A1TA0A576 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
TCRBV9S1A1TA0A576 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TCRBV9S1A1TA0A576 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
TCRBV9S1A1TA0A576 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TCRBV9S1A1TA0A576 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.32■■□□□ 1.8
TCRBV9S1A1TA0A576 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TCRBV9S1A1TA0A576 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TCRBV9S1A1TA0A576 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TCRBV9S1A1TA0A576 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.31■■□□□ 1.8
TCRBV9S1A1TA0A576 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
TCRBV9S1A1TA0A576 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TCRBV9S1A1TA0A576 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.27■■□□□ 1.8
TCRBV9S1A1TA0A576 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.27■■□□□ 1.8
TCRBV9S1A1TA0A576 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.27■■□□□ 1.8
TCRBV9S1A1TA0A576 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.27■■□□□ 1.8
TCRBV9S1A1TA0A576 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TCRBV9S1A1TA0A576 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TCRBV9S1A1TA0A576 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TCRBV9S1A1TA0A576 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TCRBV9S1A1TA0A576 RARRES2P7-201ENST00000567349 469 ntBASIC26.25■■□□□ 1.79
TCRBV9S1A1TA0A576 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
TCRBV9S1A1TA0A576 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TCRBV9S1A1TA0A576 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TCRBV9S1A1TA0A576 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TCRBV9S1A1TA0A576 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.23■■□□□ 1.79
TCRBV9S1A1TA0A576 SETD8P1-201ENST00000623146 1180 ntBASIC26.23■■□□□ 1.79
TCRBV9S1A1TA0A576 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TCRBV9S1A1TA0A576 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.22■■□□□ 1.79
TCRBV9S1A1TA0A576 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TCRBV9S1A1TA0A576 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.21■■□□□ 1.79
TCRBV9S1A1TA0A576 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TCRBV9S1A1TA0A576 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
TCRBV9S1A1TA0A576 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
TCRBV9S1A1TA0A576 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TCRBV9S1A1TA0A576 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TCRBV9S1A1TA0A576 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TCRBV9S1A1TA0A576 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.19■■□□□ 1.78
TCRBV9S1A1TA0A576 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TCRBV9S1A1TA0A576 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TCRBV9S1A1TA0A576 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.16■■□□□ 1.78
TCRBV9S1A1TA0A576 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.16■■□□□ 1.78
TCRBV9S1A1TA0A576 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.16■■□□□ 1.78
TCRBV9S1A1TA0A576 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TCRBV9S1A1TA0A576 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TCRBV9S1A1TA0A576 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TCRBV9S1A1TA0A576 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TCRBV9S1A1TA0A576 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TCRBV9S1A1TA0A576 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TCRBV9S1A1TA0A576 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
TCRBV9S1A1TA0A576 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.77
TCRBV9S1A1TA0A576 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.13■■□□□ 1.77
TCRBV9S1A1TA0A576 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms