Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.01■■□□□ 1.11
C13orf42A0A1B0GVH6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22■■□□□ 1.11
C13orf42A0A1B0GVH6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
C13orf42A0A1B0GVH6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
C13orf42A0A1B0GVH6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
C13orf42A0A1B0GVH6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
C13orf42A0A1B0GVH6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
C13orf42A0A1B0GVH6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
C13orf42A0A1B0GVH6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
C13orf42A0A1B0GVH6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
C13orf42A0A1B0GVH6 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.97■■□□□ 1.11
C13orf42A0A1B0GVH6 AL031258.1-201ENST00000623562 325 ntBASIC21.97■■□□□ 1.11
C13orf42A0A1B0GVH6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
C13orf42A0A1B0GVH6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
C13orf42A0A1B0GVH6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.96■■□□□ 1.11
C13orf42A0A1B0GVH6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
C13orf42A0A1B0GVH6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
C13orf42A0A1B0GVH6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
C13orf42A0A1B0GVH6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C13orf42A0A1B0GVH6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
C13orf42A0A1B0GVH6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
C13orf42A0A1B0GVH6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.92■■□□□ 1.1
C13orf42A0A1B0GVH6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
C13orf42A0A1B0GVH6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
C13orf42A0A1B0GVH6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
C13orf42A0A1B0GVH6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.91■■□□□ 1.1
C13orf42A0A1B0GVH6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
C13orf42A0A1B0GVH6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
C13orf42A0A1B0GVH6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
C13orf42A0A1B0GVH6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
C13orf42A0A1B0GVH6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
C13orf42A0A1B0GVH6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
C13orf42A0A1B0GVH6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
C13orf42A0A1B0GVH6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
C13orf42A0A1B0GVH6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
C13orf42A0A1B0GVH6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
C13orf42A0A1B0GVH6 AL135925.1-201ENST00000605920 1701 ntBASIC21.88■■□□□ 1.09
C13orf42A0A1B0GVH6 AL121749.1-202ENST00000609313 2153 ntBASIC21.88■■□□□ 1.09
C13orf42A0A1B0GVH6 AC135731.1-201ENST00000569415 2548 ntBASIC21.87■■□□□ 1.09
C13orf42A0A1B0GVH6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
C13orf42A0A1B0GVH6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C13orf42A0A1B0GVH6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
C13orf42A0A1B0GVH6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
C13orf42A0A1B0GVH6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
C13orf42A0A1B0GVH6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.85■■□□□ 1.09
C13orf42A0A1B0GVH6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
C13orf42A0A1B0GVH6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C13orf42A0A1B0GVH6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
C13orf42A0A1B0GVH6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.84■■□□□ 1.09
C13orf42A0A1B0GVH6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.84■■□□□ 1.09
C13orf42A0A1B0GVH6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
C13orf42A0A1B0GVH6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C13orf42A0A1B0GVH6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.82■■□□□ 1.08
C13orf42A0A1B0GVH6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C13orf42A0A1B0GVH6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.81■■□□□ 1.08
C13orf42A0A1B0GVH6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.8■■□□□ 1.08
C13orf42A0A1B0GVH6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C13orf42A0A1B0GVH6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C13orf42A0A1B0GVH6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C13orf42A0A1B0GVH6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
C13orf42A0A1B0GVH6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
C13orf42A0A1B0GVH6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
C13orf42A0A1B0GVH6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
C13orf42A0A1B0GVH6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.78■■□□□ 1.08
C13orf42A0A1B0GVH6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.78■■□□□ 1.08
C13orf42A0A1B0GVH6 DRD5P2-201ENST00000421395 2012 ntBASIC21.78■■□□□ 1.08
C13orf42A0A1B0GVH6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
C13orf42A0A1B0GVH6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
C13orf42A0A1B0GVH6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.76■■□□□ 1.07
C13orf42A0A1B0GVH6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.75■■□□□ 1.07
C13orf42A0A1B0GVH6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
C13orf42A0A1B0GVH6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
C13orf42A0A1B0GVH6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
C13orf42A0A1B0GVH6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C13orf42A0A1B0GVH6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C13orf42A0A1B0GVH6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
C13orf42A0A1B0GVH6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C13orf42A0A1B0GVH6 AL139393.2-201ENST00000608721 2025 ntBASIC21.74■■□□□ 1.07
C13orf42A0A1B0GVH6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
C13orf42A0A1B0GVH6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C13orf42A0A1B0GVH6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C13orf42A0A1B0GVH6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C13orf42A0A1B0GVH6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
C13orf42A0A1B0GVH6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
C13orf42A0A1B0GVH6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
C13orf42A0A1B0GVH6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
C13orf42A0A1B0GVH6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
C13orf42A0A1B0GVH6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
C13orf42A0A1B0GVH6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C13orf42A0A1B0GVH6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
C13orf42A0A1B0GVH6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
C13orf42A0A1B0GVH6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms