Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV27A0A0K0K1C4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV27A0A0K0K1C4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV27A0A0K0K1C4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV27A0A0K0K1C4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TRBV27A0A0K0K1C4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV27A0A0K0K1C4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV27A0A0K0K1C4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.56■□□□□ 0.56
TRBV27A0A0K0K1C4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV27A0A0K0K1C4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV27A0A0K0K1C4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRBV27A0A0K0K1C4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV27A0A0K0K1C4 AL121749.1-202ENST00000609313 2153 ntBASIC18.55■□□□□ 0.56
TRBV27A0A0K0K1C4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV27A0A0K0K1C4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV27A0A0K0K1C4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV27A0A0K0K1C4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV27A0A0K0K1C4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV27A0A0K0K1C4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRBV27A0A0K0K1C4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV27A0A0K0K1C4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRBV27A0A0K0K1C4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV27A0A0K0K1C4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV27A0A0K0K1C4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV27A0A0K0K1C4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV27A0A0K0K1C4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV27A0A0K0K1C4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV27A0A0K0K1C4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV27A0A0K0K1C4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV27A0A0K0K1C4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV27A0A0K0K1C4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV27A0A0K0K1C4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV27A0A0K0K1C4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV27A0A0K0K1C4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV27A0A0K0K1C4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV27A0A0K0K1C4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV27A0A0K0K1C4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV27A0A0K0K1C4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV27A0A0K0K1C4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRBV27A0A0K0K1C4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TRBV27A0A0K0K1C4 WASH5P-204ENST00000632292 975 ntBASIC18.47■□□□□ 0.55
TRBV27A0A0K0K1C4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV27A0A0K0K1C4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV27A0A0K0K1C4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV27A0A0K0K1C4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV27A0A0K0K1C4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV27A0A0K0K1C4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBV27A0A0K0K1C4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV27A0A0K0K1C4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV27A0A0K0K1C4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV27A0A0K0K1C4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV27A0A0K0K1C4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV27A0A0K0K1C4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBV27A0A0K0K1C4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV27A0A0K0K1C4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV27A0A0K0K1C4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV27A0A0K0K1C4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV27A0A0K0K1C4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV27A0A0K0K1C4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRBV27A0A0K0K1C4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRBV27A0A0K0K1C4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV27A0A0K0K1C4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV27A0A0K0K1C4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV27A0A0K0K1C4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRBV27A0A0K0K1C4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV27A0A0K0K1C4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
TRBV27A0A0K0K1C4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV27A0A0K0K1C4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
TRBV27A0A0K0K1C4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBV27A0A0K0K1C4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRBV27A0A0K0K1C4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV27A0A0K0K1C4 AC010864.1-201ENST00000609407 1511 ntBASIC18.4■□□□□ 0.54
TRBV27A0A0K0K1C4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV27A0A0K0K1C4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRBV27A0A0K0K1C4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV27A0A0K0K1C4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV27A0A0K0K1C4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV27A0A0K0K1C4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV27A0A0K0K1C4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV27A0A0K0K1C4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV27A0A0K0K1C4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV27A0A0K0K1C4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV27A0A0K0K1C4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV27A0A0K0K1C4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRBV27A0A0K0K1C4 BX255925.1-201ENST00000566954 1854 ntBASIC18.37■□□□□ 0.53
TRBV27A0A0K0K1C4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV27A0A0K0K1C4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV27A0A0K0K1C4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV27A0A0K0K1C4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV27A0A0K0K1C4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV27A0A0K0K1C4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV27A0A0K0K1C4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV27A0A0K0K1C4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV27A0A0K0K1C4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRBV27A0A0K0K1C4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV27A0A0K0K1C4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRBV27A0A0K0K1C4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV27A0A0K0K1C4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV27A0A0K0K1C4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV27A0A0K0K1C4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms