Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRAV17A0A0B4J275 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRAV17A0A0B4J275 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.14■■□□□ 1.45
TRAV17A0A0B4J275 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRAV17A0A0B4J275 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRAV17A0A0B4J275 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRAV17A0A0B4J275 CR559946.2-201ENST00000623684 991 ntBASIC24.13■■□□□ 1.45
TRAV17A0A0B4J275 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRAV17A0A0B4J275 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRAV17A0A0B4J275 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.11■■□□□ 1.45
TRAV17A0A0B4J275 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRAV17A0A0B4J275 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.1■■□□□ 1.45
TRAV17A0A0B4J275 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
TRAV17A0A0B4J275 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.09■■□□□ 1.45
TRAV17A0A0B4J275 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRAV17A0A0B4J275 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRAV17A0A0B4J275 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TRAV17A0A0B4J275 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
TRAV17A0A0B4J275 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRAV17A0A0B4J275 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRAV17A0A0B4J275 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRAV17A0A0B4J275 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.06■■□□□ 1.44
TRAV17A0A0B4J275 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRAV17A0A0B4J275 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.06■■□□□ 1.44
TRAV17A0A0B4J275 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRAV17A0A0B4J275 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRAV17A0A0B4J275 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
TRAV17A0A0B4J275 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRAV17A0A0B4J275 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRAV17A0A0B4J275 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRAV17A0A0B4J275 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
TRAV17A0A0B4J275 AL161658.1-201ENST00000623641 1967 ntBASIC24.04■■□□□ 1.44
TRAV17A0A0B4J275 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRAV17A0A0B4J275 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L13-201ENST00000554103 1267 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L15-201ENST00000611059 1267 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L23-201ENST00000615195 1269 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L24-201ENST00000617576 1269 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L22-201ENST00000618238 1269 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L20-201ENST00000619712 1269 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L21-201ENST00000622058 1269 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L10-201ENST00000622460 1267 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 DUX4L25-201ENST00000624915 1269 ntBASIC24.03■■□□□ 1.44
TRAV17A0A0B4J275 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRAV17A0A0B4J275 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRAV17A0A0B4J275 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRAV17A0A0B4J275 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.01■■□□□ 1.43
TRAV17A0A0B4J275 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TRAV17A0A0B4J275 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRAV17A0A0B4J275 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
TRAV17A0A0B4J275 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24■■□□□ 1.43
TRAV17A0A0B4J275 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
TRAV17A0A0B4J275 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRAV17A0A0B4J275 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRAV17A0A0B4J275 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRAV17A0A0B4J275 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRAV17A0A0B4J275 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.98■■□□□ 1.43
TRAV17A0A0B4J275 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TRAV17A0A0B4J275 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TRAV17A0A0B4J275 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.96■■□□□ 1.43
TRAV17A0A0B4J275 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRAV17A0A0B4J275 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.96■■□□□ 1.43
TRAV17A0A0B4J275 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRAV17A0A0B4J275 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.95■■□□□ 1.42
TRAV17A0A0B4J275 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.95■■□□□ 1.42
TRAV17A0A0B4J275 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
TRAV17A0A0B4J275 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
TRAV17A0A0B4J275 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.94■■□□□ 1.42
TRAV17A0A0B4J275 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.94■■□□□ 1.42
TRAV17A0A0B4J275 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.93■■□□□ 1.42
TRAV17A0A0B4J275 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRAV17A0A0B4J275 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.92■■□□□ 1.42
TRAV17A0A0B4J275 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.92■■□□□ 1.42
TRAV17A0A0B4J275 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.92■■□□□ 1.42
TRAV17A0A0B4J275 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRAV17A0A0B4J275 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRAV17A0A0B4J275 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.9■■□□□ 1.42
TRAV17A0A0B4J275 HSD17B1P1-201ENST00000590052 955 ntBASIC23.9■■□□□ 1.42
TRAV17A0A0B4J275 AC010864.1-201ENST00000609407 1511 ntBASIC23.89■■□□□ 1.42
TRAV17A0A0B4J275 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.89■■□□□ 1.42
TRAV17A0A0B4J275 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRAV17A0A0B4J275 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRAV17A0A0B4J275 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAV17A0A0B4J275 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRAV17A0A0B4J275 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TRAV17A0A0B4J275 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRAV17A0A0B4J275 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
TRAV17A0A0B4J275 LINC00273-201ENST00000539813 1452 ntBASIC23.87■■□□□ 1.41
TRAV17A0A0B4J275 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.86■■□□□ 1.41
TRAV17A0A0B4J275 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAV17A0A0B4J275 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRAV17A0A0B4J275 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAV17A0A0B4J275 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.84■■□□□ 1.41
TRAV17A0A0B4J275 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.84■■□□□ 1.41
TRAV17A0A0B4J275 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAV17A0A0B4J275 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRAV17A0A0B4J275 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRAV17A0A0B4J275 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.83■■□□□ 1.41
TRAV17A0A0B4J275 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRAV17A0A0B4J275 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms