Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAV5A0A0B4J249 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV5A0A0B4J249 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAV5A0A0B4J249 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TRAV5A0A0B4J249 AP002365.1-201ENST00000603448 772 ntBASIC20.34■□□□□ 0.85
TRAV5A0A0B4J249 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAV5A0A0B4J249 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAV5A0A0B4J249 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRAV5A0A0B4J249 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV5A0A0B4J249 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV5A0A0B4J249 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV5A0A0B4J249 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
TRAV5A0A0B4J249 DRD5P2-201ENST00000421395 2012 ntBASIC20.3■□□□□ 0.84
TRAV5A0A0B4J249 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
TRAV5A0A0B4J249 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV5A0A0B4J249 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV5A0A0B4J249 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV5A0A0B4J249 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV5A0A0B4J249 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV5A0A0B4J249 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV5A0A0B4J249 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRAV5A0A0B4J249 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV5A0A0B4J249 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV5A0A0B4J249 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRAV5A0A0B4J249 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV5A0A0B4J249 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAV5A0A0B4J249 WASH5P-204ENST00000632292 975 ntBASIC20.27■□□□□ 0.84
TRAV5A0A0B4J249 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
TRAV5A0A0B4J249 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV5A0A0B4J249 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV5A0A0B4J249 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV5A0A0B4J249 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV5A0A0B4J249 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV5A0A0B4J249 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV5A0A0B4J249 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV5A0A0B4J249 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV5A0A0B4J249 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV5A0A0B4J249 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRAV5A0A0B4J249 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV5A0A0B4J249 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV5A0A0B4J249 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV5A0A0B4J249 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TRAV5A0A0B4J249 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV5A0A0B4J249 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRAV5A0A0B4J249 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV5A0A0B4J249 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV5A0A0B4J249 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV5A0A0B4J249 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV5A0A0B4J249 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAV5A0A0B4J249 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAV5A0A0B4J249 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV5A0A0B4J249 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAV5A0A0B4J249 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV5A0A0B4J249 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV5A0A0B4J249 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TRAV5A0A0B4J249 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV5A0A0B4J249 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV5A0A0B4J249 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV5A0A0B4J249 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRAV5A0A0B4J249 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV5A0A0B4J249 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRAV5A0A0B4J249 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV5A0A0B4J249 AL121749.1-202ENST00000609313 2153 ntBASIC20.15■□□□□ 0.82
TRAV5A0A0B4J249 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAV5A0A0B4J249 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV5A0A0B4J249 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAV5A0A0B4J249 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV5A0A0B4J249 AC010864.1-201ENST00000609407 1511 ntBASIC20.14■□□□□ 0.81
TRAV5A0A0B4J249 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV5A0A0B4J249 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV5A0A0B4J249 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAV5A0A0B4J249 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV5A0A0B4J249 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV5A0A0B4J249 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRAV5A0A0B4J249 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV5A0A0B4J249 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.12■□□□□ 0.81
TRAV5A0A0B4J249 AL133380.1-201ENST00000506013 324 ntBASIC20.12■□□□□ 0.81
TRAV5A0A0B4J249 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV5A0A0B4J249 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAV5A0A0B4J249 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV5A0A0B4J249 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.11■□□□□ 0.81
TRAV5A0A0B4J249 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV5A0A0B4J249 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
TRAV5A0A0B4J249 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV5A0A0B4J249 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV5A0A0B4J249 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRAV5A0A0B4J249 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV5A0A0B4J249 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV5A0A0B4J249 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV5A0A0B4J249 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV5A0A0B4J249 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV5A0A0B4J249 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV5A0A0B4J249 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.09■□□□□ 0.81
TRAV5A0A0B4J249 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV5A0A0B4J249 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV5A0A0B4J249 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.08■□□□□ 0.81
TRAV5A0A0B4J249 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.08■□□□□ 0.81
TRAV5A0A0B4J249 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV5A0A0B4J249 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV5A0A0B4J249 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms