Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV12-1A0A0B4J245 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV12-1A0A0B4J245 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-1A0A0B4J245 INO80B-203ENST00000409917 796 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV12-1A0A0B4J245 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV12-1A0A0B4J245 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRAV12-1A0A0B4J245 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV12-1A0A0B4J245 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV12-1A0A0B4J245 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV12-1A0A0B4J245 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV12-1A0A0B4J245 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV12-1A0A0B4J245 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV12-1A0A0B4J245 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-1A0A0B4J245 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-1A0A0B4J245 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV12-1A0A0B4J245 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV12-1A0A0B4J245 AL139393.2-201ENST00000608721 2025 ntBASIC18.49■□□□□ 0.55
TRAV12-1A0A0B4J245 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-1A0A0B4J245 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-1A0A0B4J245 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV12-1A0A0B4J245 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV12-1A0A0B4J245 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV12-1A0A0B4J245 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV12-1A0A0B4J245 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-1A0A0B4J245 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV12-1A0A0B4J245 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV12-1A0A0B4J245 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRAV12-1A0A0B4J245 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV12-1A0A0B4J245 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV12-1A0A0B4J245 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV12-1A0A0B4J245 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV12-1A0A0B4J245 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TRAV12-1A0A0B4J245 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV12-1A0A0B4J245 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TRAV12-1A0A0B4J245 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV12-1A0A0B4J245 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV12-1A0A0B4J245 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRAV12-1A0A0B4J245 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-1A0A0B4J245 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV12-1A0A0B4J245 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-1A0A0B4J245 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV12-1A0A0B4J245 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV12-1A0A0B4J245 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TRAV12-1A0A0B4J245 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV12-1A0A0B4J245 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV12-1A0A0B4J245 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV12-1A0A0B4J245 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-1A0A0B4J245 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-1A0A0B4J245 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-1A0A0B4J245 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAV12-1A0A0B4J245 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-1A0A0B4J245 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV12-1A0A0B4J245 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV12-1A0A0B4J245 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRAV12-1A0A0B4J245 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAV12-1A0A0B4J245 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV12-1A0A0B4J245 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV12-1A0A0B4J245 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV12-1A0A0B4J245 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV12-1A0A0B4J245 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV12-1A0A0B4J245 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAV12-1A0A0B4J245 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV12-1A0A0B4J245 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRAV12-1A0A0B4J245 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV12-1A0A0B4J245 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRAV12-1A0A0B4J245 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV12-1A0A0B4J245 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV12-1A0A0B4J245 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV12-1A0A0B4J245 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRAV12-1A0A0B4J245 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV12-1A0A0B4J245 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV12-1A0A0B4J245 BX255925.1-201ENST00000566954 1854 ntBASIC18.32■□□□□ 0.52
TRAV12-1A0A0B4J245 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-1A0A0B4J245 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV12-1A0A0B4J245 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV12-1A0A0B4J245 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV12-1A0A0B4J245 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV12-1A0A0B4J245 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
TRAV12-1A0A0B4J245 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-1A0A0B4J245 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV12-1A0A0B4J245 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV12-1A0A0B4J245 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRAV12-1A0A0B4J245 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV12-1A0A0B4J245 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-1A0A0B4J245 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV12-1A0A0B4J245 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV12-1A0A0B4J245 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRAV12-1A0A0B4J245 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-1A0A0B4J245 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV12-1A0A0B4J245 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRAV12-1A0A0B4J245 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV12-1A0A0B4J245 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV12-1A0A0B4J245 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV12-1A0A0B4J245 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TRAV12-1A0A0B4J245 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-1A0A0B4J245 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-1A0A0B4J245 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV12-1A0A0B4J245 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-1A0A0B4J245 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-1A0A0B4J245 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms