Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV20-1A0A075B6N2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRBV20-1A0A075B6N2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV20-1A0A075B6N2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV20-1A0A075B6N2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV20-1A0A075B6N2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.71■□□□□ 0.43
TRBV20-1A0A075B6N2 ST7-AS1-201ENST00000456775 1889 ntBASIC17.71■□□□□ 0.43
TRBV20-1A0A075B6N2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.7■□□□□ 0.42
TRBV20-1A0A075B6N2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRBV20-1A0A075B6N2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRBV20-1A0A075B6N2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV20-1A0A075B6N2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRBV20-1A0A075B6N2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV20-1A0A075B6N2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV20-1A0A075B6N2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRBV20-1A0A075B6N2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV20-1A0A075B6N2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV20-1A0A075B6N2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV20-1A0A075B6N2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV20-1A0A075B6N2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV20-1A0A075B6N2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRBV20-1A0A075B6N2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV20-1A0A075B6N2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV20-1A0A075B6N2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV20-1A0A075B6N2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV20-1A0A075B6N2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV20-1A0A075B6N2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV20-1A0A075B6N2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV20-1A0A075B6N2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV20-1A0A075B6N2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV20-1A0A075B6N2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV20-1A0A075B6N2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV20-1A0A075B6N2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV20-1A0A075B6N2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV20-1A0A075B6N2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.64■□□□□ 0.42
TRBV20-1A0A075B6N2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.64■□□□□ 0.42
TRBV20-1A0A075B6N2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRBV20-1A0A075B6N2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV20-1A0A075B6N2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV20-1A0A075B6N2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV20-1A0A075B6N2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV20-1A0A075B6N2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV20-1A0A075B6N2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRBV20-1A0A075B6N2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV20-1A0A075B6N2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRBV20-1A0A075B6N2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TRBV20-1A0A075B6N2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV20-1A0A075B6N2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRBV20-1A0A075B6N2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TRBV20-1A0A075B6N2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV20-1A0A075B6N2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRBV20-1A0A075B6N2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV20-1A0A075B6N2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV20-1A0A075B6N2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV20-1A0A075B6N2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRBV20-1A0A075B6N2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV20-1A0A075B6N2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV20-1A0A075B6N2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV20-1A0A075B6N2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRBV20-1A0A075B6N2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV20-1A0A075B6N2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV20-1A0A075B6N2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRBV20-1A0A075B6N2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV20-1A0A075B6N2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV20-1A0A075B6N2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV20-1A0A075B6N2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV20-1A0A075B6N2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV20-1A0A075B6N2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRBV20-1A0A075B6N2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV20-1A0A075B6N2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV20-1A0A075B6N2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRBV20-1A0A075B6N2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV20-1A0A075B6N2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRBV20-1A0A075B6N2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV20-1A0A075B6N2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV20-1A0A075B6N2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV20-1A0A075B6N2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV20-1A0A075B6N2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV20-1A0A075B6N2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV20-1A0A075B6N2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV20-1A0A075B6N2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRBV20-1A0A075B6N2 AL449106.1-201ENST00000608517 1980 ntBASIC17.53■□□□□ 0.4
TRBV20-1A0A075B6N2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV20-1A0A075B6N2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV20-1A0A075B6N2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV20-1A0A075B6N2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRBV20-1A0A075B6N2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.52■□□□□ 0.4
TRBV20-1A0A075B6N2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV20-1A0A075B6N2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRBV20-1A0A075B6N2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV20-1A0A075B6N2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRBV20-1A0A075B6N2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV20-1A0A075B6N2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRBV20-1A0A075B6N2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV20-1A0A075B6N2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV20-1A0A075B6N2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV20-1A0A075B6N2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV20-1A0A075B6N2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRBV20-1A0A075B6N2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV20-1A0A075B6N2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms