Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 APEX1-216ENST00000557159 1803 ntTSL 29.18□□□□□ -0.941e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-218ENST00000557344 671 ntTSL 29.05□□□□□ -0.961e-7■■□□□ 14.1
PRPF8Q6P2Q9 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.72□□□□□ -1.331e-7■■□□□ 14.1
PRPF8Q6P2Q9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.144e-6■■□□□ 14.1
PRPF8Q6P2Q9 PRSS53-202ENST00000486499 5489 ntTSL 211.42□□□□□ -0.584e-6■■□□□ 14.1
PRPF8Q6P2Q9 EPHA2-204ENST00000480202 795 ntTSL 515.29■□□□□ 0.047e-8■■□□□ 14.1
PRPF8Q6P2Q9 SKI-202ENST00000478223 294 ntTSL 310.08□□□□□ -0.88e-9■■□□□ 14.1
PRPF8Q6P2Q9 ERBB2-210ENST00000580074 754 ntTSL 310.04□□□□□ -0.82e-9■■□□□ 14.1
PRPF8Q6P2Q9 SNAP47-212ENST00000606873 829 ntAPPRIS ALT2 TSL 210.38□□□□□ -0.752e-7■■□□□ 14.1
PRPF8Q6P2Q9 NPEPL1-205ENST00000527081 2061 ntTSL 212.54□□□□□ -0.42e-7■■□□□ 14.1
PRPF8Q6P2Q9 TMEM120A-215ENST00000493251 641 ntTSL 312.37□□□□□ -0.432e-7■■□□□ 14.1
PRPF8Q6P2Q9 DENND4B-209ENST00000483561 499 ntTSL 419.8■□□□□ 0.762e-7■■□□□ 14.1
PRPF8Q6P2Q9 TPM4-208ENST00000588410 563 ntTSL 416.45■□□□□ 0.222e-6■■□□□ 14.1
PRPF8Q6P2Q9 MYO19-218ENST00000617189 1990 ntTSL 213.01□□□□□ -0.335e-7■■□□□ 14.1
PRPF8Q6P2Q9 RAB11FIP3-206ENST00000452814 804 ntTSL 513.55□□□□□ -0.246e-8■■□□□ 14.1
PRPF8Q6P2Q9 UBE2J2-206ENST00000422076 643 ntTSL 518.44■□□□□ 0.541e-9■■□□□ 14.1
PRPF8Q6P2Q9 UBE2J2-209ENST00000461142 837 ntTSL 318.24■□□□□ 0.511e-9■■□□□ 14.1
PRPF8Q6P2Q9 UBE2J2-218ENST00000502382 530 ntTSL 413.89□□□□□ -0.191e-9■■□□□ 14.1
PRPF8Q6P2Q9 UBE2J2-215ENST00000477894 767 ntTSL 513.46□□□□□ -0.261e-9■■□□□ 14.1
PRPF8Q6P2Q9 UBE2V1-218ENST00000490289 628 ntTSL 38.36□□□□□ -1.079e-10■■□□□ 14.1
PRPF8Q6P2Q9 UBE2V1-208ENST00000432266 569 ntTSL 44.97□□□□□ -1.619e-10■■□□□ 14.1
PRPF8Q6P2Q9 UBE2V1-210ENST00000462217 1095 ntTSL 54.27□□□□□ -1.739e-10■■□□□ 14.1
PRPF8Q6P2Q9 UBE2V1-209ENST00000461960 649 ntTSL 53.47□□□□□ -1.859e-10■■□□□ 14.1
PRPF8Q6P2Q9 UBE2V1-213ENST00000470565 728 ntTSL 33.41□□□□□ -1.869e-10■■□□□ 14.1
PRPF8Q6P2Q9 SLC5A9-202ENST00000425816 1950 ntTSL 1 (best)11.78□□□□□ -0.525e-7■■□□□ 14.1
PRPF8Q6P2Q9 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.695e-7■■□□□ 14.1
PRPF8Q6P2Q9 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.825e-7■■□□□ 14.1
PRPF8Q6P2Q9 SLC5A9-206ENST00000493837 3769 ntTSL 28.39□□□□□ -1.075e-7■■□□□ 14.1
PRPF8Q6P2Q9 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.185e-7■■□□□ 14.1
PRPF8Q6P2Q9 QTRT1-205ENST00000587599 994 ntTSL 314.93□□□□□ -0.023e-16■■□□□ 14.1
PRPF8Q6P2Q9 SRRM2-224ENST00000575870 696 ntTSL 38.42□□□□□ -1.067e-10■■□□□ 14.1
PRPF8Q6P2Q9 HMGCR-206ENST00000508070 450 ntTSL 36.99□□□□□ -1.293e-18■■□□□ 14.1
PRPF8Q6P2Q9 PREB-203ENST00000416802 564 ntTSL 420.61■□□□□ 0.892e-8■■□□□ 14.1
PRPF8Q6P2Q9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.33□□□□□ -0.441e-7■■□□□ 14.1
PRPF8Q6P2Q9 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.571e-7■■□□□ 14.1
PRPF8Q6P2Q9 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.761e-7■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-210ENST00000589381 738 ntTSL 515.64■□□□□ 0.091e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.53□□□□□ -0.081e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.93□□□□□ -0.181e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-214ENST00000592083 938 ntTSL 513.12□□□□□ -0.311e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-213ENST00000592023 738 ntTSL 512.9□□□□□ -0.341e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-217ENST00000592905 882 ntTSL 212.84□□□□□ -0.351e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.42□□□□□ -0.421e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-205ENST00000587888 556 ntTSL 512.16□□□□□ -0.462e-8■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.531e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC9.51□□□□□ -0.891e-6■■□□□ 14.1
PRPF8Q6P2Q9 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.921e-6■■□□□ 14.1
PRPF8Q6P2Q9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.382e-11■■□□□ 14.1
PRPF8Q6P2Q9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.372e-11■■□□□ 14.1
PRPF8Q6P2Q9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.172e-11■■□□□ 14.1
PRPF8Q6P2Q9 RARRES2-204ENST00000478771 1907 ntTSL 216.08■□□□□ 0.172e-11■■□□□ 14.1
PRPF8Q6P2Q9 RARRES2-203ENST00000467793 583 ntTSL 313.96□□□□□ -0.182e-11■■□□□ 14.1
PRPF8Q6P2Q9 GORASP2-211ENST00000497928 711 ntTSL 518.17■□□□□ 0.52e-7■■□□□ 14.1
PRPF8Q6P2Q9 GORASP2-210ENST00000497674 563 ntTSL 215.26■□□□□ 0.032e-7■■□□□ 14.1
PRPF8Q6P2Q9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.375e-7■■□□□ 14.1
PRPF8Q6P2Q9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.475e-7■■□□□ 14.1
PRPF8Q6P2Q9 ANP32A-202ENST00000409628 2001 ntTSL 510.1□□□□□ -0.795e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-211ENST00000527749 771 ntTSL 523.2■■□□□ 1.37e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.137e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.047e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-215ENST00000529389 992 ntTSL 314.86□□□□□ -0.037e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.117e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-213ENST00000527909 591 ntTSL 513.66□□□□□ -0.227e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-216ENST00000531238 541 ntTSL 413.66□□□□□ -0.227e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-222ENST00000533546 569 ntTSL 413.66□□□□□ -0.227e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.33□□□□□ -0.287e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-204ENST00000525658 808 ntTSL 212.38□□□□□ -0.437e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-220ENST00000532999 1341 ntTSL 512.2□□□□□ -0.467e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-225ENST00000534558 692 ntTSL 512.04□□□□□ -0.487e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-208ENST00000526283 2004 ntTSL 510.87□□□□□ -0.677e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-210ENST00000527074 585 ntTSL 210.76□□□□□ -0.697e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-219ENST00000532879 567 ntTSL 58.98□□□□□ -0.977e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-205ENST00000525693 3183 ntTSL 1 (best) BASIC8.41□□□□□ -1.067e-7■■□□□ 14.1
PRPF8Q6P2Q9 RELA-217ENST00000531484 2251 ntTSL 27.96□□□□□ -1.147e-7■■□□□ 14.1
PRPF8Q6P2Q9 SLC20A2-212ENST00000523340 1265 ntTSL 220.83■□□□□ 0.932e-15■■□□□ 14.1
PRPF8Q6P2Q9 SLC20A2-209ENST00000521455 411 ntTSL 316.01■□□□□ 0.152e-15■■□□□ 14.1
PRPF8Q6P2Q9 SLC20A2-214ENST00000524237 545 ntTSL 413.9□□□□□ -0.182e-15■■□□□ 14.1
PRPF8Q6P2Q9 SLC20A2-206ENST00000519463 388 ntTSL 37.88□□□□□ -1.152e-15■■□□□ 14.1
PRPF8Q6P2Q9 SLC20A2-205ENST00000518717 573 ntTSL 47.4□□□□□ -1.232e-15■■□□□ 14.1
PRPF8Q6P2Q9 SLC20A2-203ENST00000518384 557 ntTSL 46.89□□□□□ -1.312e-15■■□□□ 14.1
PRPF8Q6P2Q9 TMEM8A-203ENST00000427313 587 ntTSL 410.66□□□□□ -0.71e-6■■□□□ 14.1
PRPF8Q6P2Q9 TMF1-204ENST00000489370 372 ntTSL 50.08□□□□□ -2.44e-8■■□□□ 14.1
PRPF8Q6P2Q9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.076e-8■■□□□ 14.1
PRPF8Q6P2Q9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.176e-8■■□□□ 14.1
PRPF8Q6P2Q9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.375e-7■■□□□ 14.1
PRPF8Q6P2Q9 BMP2K-202ENST00000389010 2741 ntTSL 1 (best)16.68■□□□□ 0.265e-7■■□□□ 14.1
PRPF8Q6P2Q9 MCM7-206ENST00000465688 481 ntTSL 315.56■□□□□ 0.084e-7■■□□□ 14.1
PRPF8Q6P2Q9 HNF1A-210ENST00000543255 762 ntTSL 512.06□□□□□ -0.488e-7■■□□□ 14.1
PRPF8Q6P2Q9 HECTD1-212ENST00000556004 595 ntTSL 27.93□□□□□ -1.142e-10■■□□□ 14.1
PRPF8Q6P2Q9 SRRT-219ENST00000641476 992 nt12.71□□□□□ -0.372e-9■■□□□ 14.1
PRPF8Q6P2Q9 RTKN-209ENST00000484453 820 ntTSL 1 (best)18.83■□□□□ 0.614e-18■■□□□ 14.1
PRPF8Q6P2Q9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.35□□□□□ -0.271e-12■■□□□ 14.1
PRPF8Q6P2Q9 THTPA-208ENST00000557630 581 ntTSL 316.84■□□□□ 0.299e-11■■□□□ 14.1
PRPF8Q6P2Q9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.099e-11■■□□□ 14.1
PRPF8Q6P2Q9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.2□□□□□ -0.149e-11■■□□□ 14.1
PRPF8Q6P2Q9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.2□□□□□ -0.149e-11■■□□□ 14.1
PRPF8Q6P2Q9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.71□□□□□ -0.219e-11■■□□□ 14.1
PRPF8Q6P2Q9 THTPA-205ENST00000555446 571 ntTSL 213.33□□□□□ -0.289e-11■■□□□ 14.1
PRPF8Q6P2Q9 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.759e-11■■□□□ 14.1
PRPF8Q6P2Q9 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC9.17□□□□□ -0.949e-11■■□□□ 14.1
Retrieved 100 of 73,762 protein–RNA pairs in 1802.2 ms