Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 AC098934.4-201ENST00000564127 592 ntBASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 OR10C1-204ENST00000622521 1039 ntBASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 AC003102.1-202ENST00000563394 1796 ntBASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DNAJC28Q9NX36 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 MIR4758-201ENST00000577688 71 ntBASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 AC016405.3-201ENST00000607710 860 ntBASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 TMEM191A-211ENST00000637163 1067 ntBASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DNAJC28Q9NX36 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 AC061975.6-201ENST00000579045 1553 ntBASIC20.72■□□□□ 0.91
DNAJC28Q9NX36 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 MIPEPP3-201ENST00000412105 444 ntBASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 AC073210.2-201ENST00000430369 194 ntBASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 AC093787.1-201ENST00000450396 207 ntBASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DNAJC28Q9NX36 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.7■□□□□ 0.9
DNAJC28Q9NX36 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DNAJC28Q9NX36 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms