Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 AC007322.1-201ENST00000426983 750 ntBASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
NECTIN3Q9NQS3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 AC243732.1-201ENST00000612648 864 ntBASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 LINC01006-201ENST00000333319 2292 ntBASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN3Q9NQS3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 CROCCP5-201ENST00000436658 830 ntBASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 AC245052.3-201ENST00000450182 901 ntBASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 AC013268.1-206ENST00000638368 961 ntBASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 AC112229.1-201ENST00000639295 961 ntBASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NECTIN3Q9NQS3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 AF106564.1-201ENST00000607058 2553 ntBASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.53■□□□□ 0.72
NECTIN3Q9NQS3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN3Q9NQS3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms