Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 TPRG1LP1-201ENST00000598702 760 ntBASIC18.76■□□□□ 0.59
KRCC1Q9NPI7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.76■□□□□ 0.59
KRCC1Q9NPI7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRCC1Q9NPI7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
KRCC1Q9NPI7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRCC1Q9NPI7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRCC1Q9NPI7 KRT16P2-201ENST00000414673 1423 ntBASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 AC092720.2-201ENST00000602388 1665 ntBASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 AL136967.2-201ENST00000623968 743 ntBASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRCC1Q9NPI7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 AC110285.6-201ENST00000617652 491 ntBASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.73■□□□□ 0.59
KRCC1Q9NPI7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRCC1Q9NPI7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 AC138907.5-202ENST00000569484 235 ntBASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.71■□□□□ 0.59
KRCC1Q9NPI7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRCC1Q9NPI7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms