Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NUDCD1Q96RS6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUDCD1Q96RS6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUDCD1Q96RS6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NUDCD1Q96RS6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.08■□□□□ 0.97
NUDCD1Q96RS6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.08■□□□□ 0.97
NUDCD1Q96RS6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.08■□□□□ 0.97
NUDCD1Q96RS6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.08■□□□□ 0.97
NUDCD1Q96RS6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
NUDCD1Q96RS6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.08■□□□□ 0.96
NUDCD1Q96RS6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
NUDCD1Q96RS6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NUDCD1Q96RS6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NUDCD1Q96RS6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
NUDCD1Q96RS6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.08■□□□□ 0.96
NUDCD1Q96RS6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NUDCD1Q96RS6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 AC080038.1-201ENST00000611274 1154 ntBASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUDCD1Q96RS6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 AL049796.1-201ENST00000565336 1766 ntBASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUDCD1Q96RS6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 AC013268.1-206ENST00000638368 961 ntBASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 AC112229.1-201ENST00000639295 961 ntBASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 AF106564.1-201ENST00000607058 2553 ntBASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUDCD1Q96RS6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 AC073111.5-205ENST00000641717 521 ntBASIC21.04■□□□□ 0.96
NUDCD1Q96RS6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms