Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 ATP5G2P3-201ENST00000429083 425 ntBASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 AC004987.1-201ENST00000428627 508 ntBASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 DUX4L18-201ENST00000553347 1267 ntBASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 MIR6722-201ENST00000617286 78 ntBASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.93■□□□□ 0.78
RAB3IPQ96QF0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 AC009102.2-201ENST00000606772 1639 ntBASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 AC012354.3-201ENST00000623734 483 ntBASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 AC093503.3-201ENST00000624917 2352 ntBASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3IPQ96QF0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 TSPY13P-201ENST00000338964 914 ntBASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 AC068587.7-201ENST00000641602 218 ntBASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAB3IPQ96QF0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3IPQ96QF0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RAB3IPQ96QF0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3IPQ96QF0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3IPQ96QF0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
RAB3IPQ96QF0 AC120498.9-201ENST00000339021 3867 ntBASIC19.9■□□□□ 0.78
RAB3IPQ96QF0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3IPQ96QF0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3IPQ96QF0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 488 ms