Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
CROCCP3Q8IVE0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.52■□□□□ 0.55
CROCCP3Q8IVE0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CROCCP3Q8IVE0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CROCCP3Q8IVE0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 AC090340.1-201ENST00000620778 4980 ntBASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CROCCP3Q8IVE0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.5■□□□□ 0.55
CROCCP3Q8IVE0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 AL499627.2-201ENST00000606283 725 ntBASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 AL031602.1-201ENST00000633169 911 ntBASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 AP000997.3-201ENST00000623333 2250 ntBASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CROCCP3Q8IVE0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 AL138781.2-201ENST00000617896 1843 ntBASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CROCCP3Q8IVE0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms