Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 BX005040.4-201ENST00000637145 1518 ntBASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTCHD4Q6ZW05 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 MIR572-201ENST00000384983 95 ntBASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 AL136967.2-201ENST00000623968 743 ntBASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTCHD4Q6ZW05 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 AC138932.1-201ENST00000534164 6830 ntBASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTCHD4Q6ZW05 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.59
PTCHD4Q6ZW05 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 AC091305.1-201ENST00000479476 895 ntBASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.76■□□□□ 0.59
PTCHD4Q6ZW05 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTCHD4Q6ZW05 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 AC087289.5-201ENST00000586076 3175 ntBASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PTCHD4Q6ZW05 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCHD4Q6ZW05 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms