Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX4Q33E94 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RFX4Q33E94 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.98■□□□□ 0.63
RFX4Q33E94 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX4Q33E94 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX4Q33E94 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RFX4Q33E94 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.98■□□□□ 0.63
RFX4Q33E94 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX4Q33E94 IGHV3-19-201ENST00000521488 291 ntBASIC18.98■□□□□ 0.63
RFX4Q33E94 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.98■□□□□ 0.63
RFX4Q33E94 AL136162.1-201ENST00000607711 1078 ntBASIC18.98■□□□□ 0.63
RFX4Q33E94 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RFX4Q33E94 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RFX4Q33E94 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.98■□□□□ 0.63
RFX4Q33E94 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX4Q33E94 AC011484.1-201ENST00000377652 1995 ntBASIC18.97■□□□□ 0.63
RFX4Q33E94 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
RFX4Q33E94 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX4Q33E94 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX4Q33E94 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX4Q33E94 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX4Q33E94 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX4Q33E94 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RFX4Q33E94 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX4Q33E94 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RFX4Q33E94 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.97■□□□□ 0.63
RFX4Q33E94 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.97■□□□□ 0.63
RFX4Q33E94 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX4Q33E94 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
RFX4Q33E94 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX4Q33E94 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX4Q33E94 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RFX4Q33E94 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX4Q33E94 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RFX4Q33E94 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX4Q33E94 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.97■□□□□ 0.63
RFX4Q33E94 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX4Q33E94 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RFX4Q33E94 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX4Q33E94 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RFX4Q33E94 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX4Q33E94 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.96■□□□□ 0.63
RFX4Q33E94 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX4Q33E94 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RFX4Q33E94 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
RFX4Q33E94 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX4Q33E94 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.96■□□□□ 0.63
RFX4Q33E94 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.96■□□□□ 0.63
RFX4Q33E94 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RFX4Q33E94 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RFX4Q33E94 AC116562.4-201ENST00000641316 2276 ntBASIC18.95■□□□□ 0.62
RFX4Q33E94 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RFX4Q33E94 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RFX4Q33E94 AC092720.2-201ENST00000602388 1665 ntBASIC18.95■□□□□ 0.62
RFX4Q33E94 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX4Q33E94 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX4Q33E94 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX4Q33E94 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX4Q33E94 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.95■□□□□ 0.62
RFX4Q33E94 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX4Q33E94 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RFX4Q33E94 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX4Q33E94 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RFX4Q33E94 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RFX4Q33E94 AC135279.3-201ENST00000610945 1311 ntBASIC18.95■□□□□ 0.62
RFX4Q33E94 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.95■□□□□ 0.62
RFX4Q33E94 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RFX4Q33E94 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
RFX4Q33E94 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.94■□□□□ 0.62
RFX4Q33E94 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.94■□□□□ 0.62
RFX4Q33E94 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
RFX4Q33E94 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.94■□□□□ 0.62
RFX4Q33E94 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX4Q33E94 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RFX4Q33E94 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX4Q33E94 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFX4Q33E94 AC055733.4-201ENST00000638462 1354 ntBASIC18.93■□□□□ 0.62
RFX4Q33E94 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms