Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 DYRK1A-206ENST00000455097 338 ntTSL 1 (best)7.03□□□□□ -1.282e-7■■□□□ 13.2
EWSR1Q01844 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.31□□□□□ -1.42e-7■■□□□ 13.2
EWSR1Q01844 DYRK1A-205ENST00000426672 519 ntTSL 53.32□□□□□ -1.882e-7■■□□□ 13.2
EWSR1Q01844 SMAD6-202ENST00000557916 1401 ntTSL 1 (best)19.24■□□□□ 0.672e-6■■□□□ 13.2
EWSR1Q01844 MELTF-205ENST00000473501 2757 ntTSL 218.42■□□□□ 0.542e-6■■□□□ 13.2
EWSR1Q01844 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.81■□□□□ 0.122e-6■■□□□ 13.2
EWSR1Q01844 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.092e-6■■□□□ 13.2
EWSR1Q01844 CTDSP1-213ENST00000496785 460 ntTSL 514.25□□□□□ -0.132e-6■■□□□ 13.2
EWSR1Q01844 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.212e-6■■□□□ 13.2
EWSR1Q01844 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.65□□□□□ -0.222e-6■■□□□ 13.2
EWSR1Q01844 MELTF-203ENST00000439320 629 ntTSL 312.9□□□□□ -0.342e-6■■□□□ 13.2
EWSR1Q01844 LASP1-209ENST00000585841 1408 ntTSL 212.88□□□□□ -0.352e-6■■□□□ 13.2
EWSR1Q01844 CTDSP1-203ENST00000431127 586 ntTSL 312.81□□□□□ -0.362e-6■■□□□ 13.2
EWSR1Q01844 LASP1-205ENST00000443937 1482 ntTSL 1 (best)12.2□□□□□ -0.462e-6■■□□□ 13.2
EWSR1Q01844 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.522e-6■■□□□ 13.2
EWSR1Q01844 CTDSP1-202ENST00000428361 842 ntTSL 511.34□□□□□ -0.592e-6■■□□□ 13.2
EWSR1Q01844 SMAD6-204ENST00000559931 573 ntTSL 311.06□□□□□ -0.642e-6■■□□□ 13.2
EWSR1Q01844 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.672e-6■■□□□ 13.2
EWSR1Q01844 AC084125.2-204ENST00000527086 556 ntTSL 410.61□□□□□ -0.712e-6■■□□□ 13.2
EWSR1Q01844 LASP1-203ENST00000433206 4023 ntTSL 2 BASIC9.76□□□□□ -0.852e-6■■□□□ 13.2
EWSR1Q01844 LASP1-208ENST00000584106 1167 ntTSL 29.75□□□□□ -0.852e-6■■□□□ 13.2
EWSR1Q01844 AC084125.2-205ENST00000528690 323 ntTSL 39.68□□□□□ -0.862e-6■■□□□ 13.2
EWSR1Q01844 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.862e-6■■□□□ 13.2
EWSR1Q01844 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.942e-6■■□□□ 13.2
EWSR1Q01844 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC7.65□□□□□ -1.182e-6■■□□□ 13.2
EWSR1Q01844 ELAVL1-204ENST00000596154 880 ntTSL 36.05□□□□□ -1.442e-6■■□□□ 13.2
EWSR1Q01844 CAPRIN1-211ENST00000532755 565 ntTSL 44.09□□□□□ -1.752e-6■■□□□ 13.2
EWSR1Q01844 FASN-208ENST00000635733 100 ntTSL 56.39□□□□□ -1.391e-12■■□□□ 13.2
EWSR1Q01844 AC092127.1-201ENST00000567093 3455 ntBASIC13.06□□□□□ -0.327e-9■■□□□ 13.2
EWSR1Q01844 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC10□□□□□ -0.811e-7■■□□□ 13.2
EWSR1Q01844 AMDHD2-210ENST00000565570 1844 ntTSL 515.13■□□□□ 0.012e-7■■□□□ 13.1
EWSR1Q01844 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.57□□□□□ -0.562e-7■■□□□ 13.1
EWSR1Q01844 RELT-207ENST00000545886 4346 ntTSL 211.73□□□□□ -0.531e-6■■□□□ 13.1
EWSR1Q01844 AXIN1-205ENST00000481769 1089 ntTSL 319.79■□□□□ 0.769e-9■■□□□ 13.1
EWSR1Q01844 FKBP2-204ENST00000535135 639 ntTSL 318.06■□□□□ 0.489e-9■■□□□ 13.1
EWSR1Q01844 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.059e-9■■□□□ 13.1
EWSR1Q01844 POLE-208ENST00000535934 1561 ntTSL 511.28□□□□□ -0.69e-9■■□□□ 13.1
EWSR1Q01844 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.729e-9■■□□□ 13.1
EWSR1Q01844 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.739e-9■■□□□ 13.1
EWSR1Q01844 POLE-210ENST00000537064 8011 ntTSL 1 (best)9.5□□□□□ -0.899e-9■■□□□ 13.1
EWSR1Q01844 LSS-203ENST00000419093 517 ntTSL 37.71□□□□□ -1.189e-9■■□□□ 13.1
EWSR1Q01844 DDX5-228ENST00000584279 676 ntTSL 315.33■□□□□ 0.042e-8■■□□□ 13.1
EWSR1Q01844 DDX5-205ENST00000577922 996 ntTSL 515.33■□□□□ 0.042e-8■■□□□ 13.1
EWSR1Q01844 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.192e-8■■□□□ 13.1
EWSR1Q01844 DDX5-220ENST00000581806 576 ntTSL 412.1□□□□□ -0.472e-8■■□□□ 13.1
EWSR1Q01844 DDX5-219ENST00000581697 580 ntTSL 512.05□□□□□ -0.482e-8■■□□□ 13.1
EWSR1Q01844 DDX5-232ENST00000585111 1051 ntTSL 211.87□□□□□ -0.512e-8■■□□□ 13.1
EWSR1Q01844 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.41□□□□□ -0.582e-8■■□□□ 13.1
EWSR1Q01844 DDX5-235ENST00000630471 473 ntTSL 4 BASIC10.99□□□□□ -0.652e-8■■□□□ 13.1
EWSR1Q01844 DDX5-207ENST00000578400 575 ntTSL 510.49□□□□□ -0.732e-8■■□□□ 13.1
EWSR1Q01844 DDX5-218ENST00000581693 2156 ntTSL 59.7□□□□□ -0.862e-8■■□□□ 13.1
EWSR1Q01844 DDX5-203ENST00000540698 2225 ntTSL 59.59□□□□□ -0.872e-8■■□□□ 13.1
EWSR1Q01844 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC9.57□□□□□ -0.882e-8■■□□□ 13.1
EWSR1Q01844 DDX5-233ENST00000585223 699 ntTSL 28.41□□□□□ -1.062e-8■■□□□ 13.1
EWSR1Q01844 DDX5-215ENST00000581230 3558 ntTSL 27.19□□□□□ -1.262e-8■■□□□ 13.1
EWSR1Q01844 DDX5-231ENST00000585060 572 ntTSL 47□□□□□ -1.292e-8■■□□□ 13.1
EWSR1Q01844 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.18□□□□□ -0.628e-34■■□□□ 13.1
EWSR1Q01844 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.89□□□□□ -0.512e-10■■□□□ 13.1
EWSR1Q01844 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC10.78□□□□□ -0.686e-8■■□□□ 13.1
EWSR1Q01844 PUM2-206ENST00000424110 546 ntTSL 410.32□□□□□ -0.766e-8■■□□□ 13.1
EWSR1Q01844 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.836e-8■■□□□ 13.1
EWSR1Q01844 PUM2-210ENST00000442400 955 ntTSL 56.77□□□□□ -1.336e-8■■□□□ 13.1
EWSR1Q01844 PUM2-208ENST00000432105 584 ntTSL 54.08□□□□□ -1.766e-8■■□□□ 13.1
EWSR1Q01844 PUM2-205ENST00000420234 562 ntTSL 53.59□□□□□ -1.836e-8■■□□□ 13.1
EWSR1Q01844 H2AFZ-202ENST00000511203 1880 ntTSL 224.08■■□□□ 1.456e-9■■□□□ 13.1
EWSR1Q01844 H2AFZ-203ENST00000511319 1254 ntTSL 1 (best)21.23■□□□□ 0.996e-9■■□□□ 13.1
EWSR1Q01844 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.27■□□□□ 0.365e-6■■□□□ 13.1
EWSR1Q01844 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.57■□□□□ 0.245e-6■■□□□ 13.1
EWSR1Q01844 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.065e-6■■□□□ 13.1
EWSR1Q01844 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.466e-9■■□□□ 13.1
EWSR1Q01844 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.495e-6■■□□□ 13.1
EWSR1Q01844 H2AFZ-204ENST00000511348 1843 ntTSL 1 (best)11.39□□□□□ -0.596e-9■■□□□ 13.1
EWSR1Q01844 H2AFZ-205ENST00000527366 435 ntTSL 39.33□□□□□ -0.926e-9■■□□□ 13.1
EWSR1Q01844 H2AFZ-206ENST00000529158 726 ntTSL 37.49□□□□□ -1.216e-9■■□□□ 13.1
EWSR1Q01844 DHRS3-201ENST00000430996 826 ntTSL 314.01□□□□□ -0.172e-6■■□□□ 13
EWSR1Q01844 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.333e-6■■□□□ 13
EWSR1Q01844 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.78□□□□□ -0.363e-6■■□□□ 13
EWSR1Q01844 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.453e-6■■□□□ 13
EWSR1Q01844 FASN-211ENST00000637026 100 ntTSL 57.69□□□□□ -1.186e-9■■□□□ 13
EWSR1Q01844 FASN-210ENST00000636968 100 ntTSL 512.42□□□□□ -0.425e-13■■□□□ 13
EWSR1Q01844 PKP4-204ENST00000421462 3099 ntTSL 214.55□□□□□ -0.083e-7■■□□□ 13
EWSR1Q01844 PKP4-205ENST00000426248 4134 ntTSL 1 (best)13.78□□□□□ -0.23e-7■■□□□ 13
EWSR1Q01844 PKP4-206ENST00000452162 2359 ntTSL 1 (best)8.94□□□□□ -0.983e-7■■□□□ 13
EWSR1Q01844 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -13e-7■■□□□ 13
EWSR1Q01844 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.183e-7■■□□□ 13
EWSR1Q01844 PKP4-203ENST00000411900 552 ntTSL 47.44□□□□□ -1.223e-7■■□□□ 13
EWSR1Q01844 PKP4-207ENST00000457109 520 ntTSL 36.49□□□□□ -1.373e-7■■□□□ 13
EWSR1Q01844 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.35□□□□□ -1.393e-7■■□□□ 13
EWSR1Q01844 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.513e-24■■□□□ 13
EWSR1Q01844 SNRNP70-209ENST00000601065 1757 ntTSL 317.47■□□□□ 0.393e-24■■□□□ 13
EWSR1Q01844 SNRNP70-204ENST00000595231 1673 ntTSL 1 (best)17.23■□□□□ 0.353e-24■■□□□ 13
EWSR1Q01844 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.21■□□□□ 0.353e-24■■□□□ 13
EWSR1Q01844 SNRNP70-202ENST00000401730 3144 ntTSL 214.64□□□□□ -0.073e-24■■□□□ 13
EWSR1Q01844 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)13.4□□□□□ -0.263e-24■■□□□ 13
EWSR1Q01844 RABL6-205ENST00000435930 3328 ntTSL 213.11□□□□□ -0.312e-8■■□□□ 13
EWSR1Q01844 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.955e-6■■□□□ 12.9
EWSR1Q01844 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.8■□□□□ 0.925e-6■■□□□ 12.9
EWSR1Q01844 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.92■□□□□ 0.625e-6■■□□□ 12.9
EWSR1Q01844 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.92■□□□□ 0.625e-6■■□□□ 12.9
EWSR1Q01844 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.525e-6■■□□□ 12.9
Retrieved 100 of 7,101 protein–RNA pairs in 47.8 ms