Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.42■□□□□ 0.38
MECP2P51608 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.42■□□□□ 0.38
MECP2P51608 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.42■□□□□ 0.38
MECP2P51608 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.42■□□□□ 0.38
MECP2P51608 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.42■□□□□ 0.38
MECP2P51608 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
MECP2P51608 MIR6724-1-201ENST00000616420 92 ntBASIC17.42■□□□□ 0.38
MECP2P51608 MIR6724-2-201ENST00000616483 92 ntBASIC17.42■□□□□ 0.38
MECP2P51608 MIR6724-4-201ENST00000617390 92 ntBASIC17.42■□□□□ 0.38
MECP2P51608 MIR6724-3-201ENST00000622482 92 ntBASIC17.42■□□□□ 0.38
MECP2P51608 AL117332.1-201ENST00000622628 974 ntBASIC17.42■□□□□ 0.38
MECP2P51608 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.42■□□□□ 0.38
MECP2P51608 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MECP2P51608 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.42■□□□□ 0.38
MECP2P51608 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.42■□□□□ 0.38
MECP2P51608 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.42■□□□□ 0.38
MECP2P51608 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.42■□□□□ 0.38
MECP2P51608 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MECP2P51608 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.41■□□□□ 0.38
MECP2P51608 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.41■□□□□ 0.38
MECP2P51608 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MECP2P51608 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MECP2P51608 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.4■□□□□ 0.38
MECP2P51608 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MECP2P51608 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.4■□□□□ 0.38
MECP2P51608 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MECP2P51608 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 AP004607.7-201ENST00000527152 1677 ntBASIC17.4■□□□□ 0.38
MECP2P51608 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
MECP2P51608 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.4■□□□□ 0.38
MECP2P51608 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.4■□□□□ 0.38
MECP2P51608 AC131212.1-201ENST00000613771 668 ntBASIC17.4■□□□□ 0.38
MECP2P51608 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.4■□□□□ 0.38
MECP2P51608 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.4■□□□□ 0.38
MECP2P51608 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.4■□□□□ 0.38
MECP2P51608 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MECP2P51608 AC004408.2-201ENST00000623613 2777 ntBASIC17.4■□□□□ 0.38
MECP2P51608 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
MECP2P51608 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.39■□□□□ 0.37
MECP2P51608 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.39■□□□□ 0.37
MECP2P51608 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.39■□□□□ 0.37
MECP2P51608 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.39■□□□□ 0.37
MECP2P51608 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.39■□□□□ 0.37
MECP2P51608 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.39■□□□□ 0.37
MECP2P51608 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
MECP2P51608 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MECP2P51608 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MECP2P51608 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.39■□□□□ 0.37
MECP2P51608 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.38■□□□□ 0.37
MECP2P51608 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MECP2P51608 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.38■□□□□ 0.37
MECP2P51608 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms