Protein–RNA interactions for Protein: P36954

POLR2I, DNA-directed RNA polymerase II subunit RPB9, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2IP36954 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.83■□□□□ 0.6
POLR2IP36954 AL512631.2-201ENST00000604634 923 ntBASIC18.83■□□□□ 0.6
POLR2IP36954 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2IP36954 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2IP36954 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2IP36954 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
POLR2IP36954 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2IP36954 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.83■□□□□ 0.6
POLR2IP36954 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
POLR2IP36954 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR2IP36954 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR2IP36954 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR2IP36954 AC055733.4-201ENST00000638462 1354 ntBASIC18.82■□□□□ 0.6
POLR2IP36954 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR2IP36954 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR2IP36954 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
POLR2IP36954 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLR2IP36954 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.82■□□□□ 0.6
POLR2IP36954 AC136469.2-201ENST00000623944 1028 ntBASIC18.82■□□□□ 0.6
POLR2IP36954 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
POLR2IP36954 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR2IP36954 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.82■□□□□ 0.6
POLR2IP36954 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR2IP36954 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR2IP36954 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR2IP36954 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2IP36954 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2IP36954 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR2IP36954 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR2IP36954 AL138724.1-201ENST00000606771 1088 ntBASIC18.81■□□□□ 0.6
POLR2IP36954 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2IP36954 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
POLR2IP36954 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.81■□□□□ 0.6
POLR2IP36954 AC092720.2-201ENST00000602388 1665 ntBASIC18.81■□□□□ 0.6
POLR2IP36954 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2IP36954 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
POLR2IP36954 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR2IP36954 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.8■□□□□ 0.6
POLR2IP36954 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 NEFHP1-201ENST00000412845 2629 ntBASIC18.8■□□□□ 0.6
POLR2IP36954 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
POLR2IP36954 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR2IP36954 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR2IP36954 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR2IP36954 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2IP36954 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2IP36954 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
POLR2IP36954 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
POLR2IP36954 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.79■□□□□ 0.6
POLR2IP36954 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
POLR2IP36954 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR2IP36954 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.79■□□□□ 0.6
POLR2IP36954 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2IP36954 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR2IP36954 LETM1P2-201ENST00000597330 2178 ntBASIC18.79■□□□□ 0.6
POLR2IP36954 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
POLR2IP36954 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR2IP36954 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR2IP36954 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
POLR2IP36954 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR2IP36954 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.78■□□□□ 0.6
POLR2IP36954 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2IP36954 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
POLR2IP36954 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR2IP36954 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2IP36954 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2IP36954 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2IP36954 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR2IP36954 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms