Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN3P26045 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN3P26045 DUX4L16-201ENST00000555130 1264 ntBASIC20.89■□□□□ 0.93
PTPN3P26045 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN3P26045 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPN3P26045 AC022517.1-201ENST00000592429 346 ntBASIC20.89■□□□□ 0.93
PTPN3P26045 AL591742.1-201ENST00000604433 565 ntBASIC20.89■□□□□ 0.93
PTPN3P26045 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN3P26045 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN3P26045 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN3P26045 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN3P26045 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN3P26045 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTPN3P26045 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTPN3P26045 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PTPN3P26045 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN3P26045 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN3P26045 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN3P26045 CNN2P6-201ENST00000439038 900 ntBASIC20.88■□□□□ 0.93
PTPN3P26045 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN3P26045 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN3P26045 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PTPN3P26045 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN3P26045 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN3P26045 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PTPN3P26045 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN3P26045 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN3P26045 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PTPN3P26045 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN3P26045 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PTPN3P26045 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.87■□□□□ 0.93
PTPN3P26045 AC073130.3-201ENST00000624389 2278 ntBASIC20.87■□□□□ 0.93
PTPN3P26045 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.87■□□□□ 0.93
PTPN3P26045 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN3P26045 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN3P26045 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.87■□□□□ 0.93
PTPN3P26045 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 FAM21FP-204ENST00000608637 956 ntBASIC20.87■□□□□ 0.93
PTPN3P26045 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.87■□□□□ 0.93
PTPN3P26045 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
PTPN3P26045 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PTPN3P26045 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN3P26045 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.87■□□□□ 0.93
PTPN3P26045 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PTPN3P26045 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.86■□□□□ 0.93
PTPN3P26045 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN3P26045 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PTPN3P26045 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPN3P26045 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN3P26045 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.86■□□□□ 0.93
PTPN3P26045 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN3P26045 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN3P26045 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.86■□□□□ 0.93
PTPN3P26045 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN3P26045 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
PTPN3P26045 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.86■□□□□ 0.93
PTPN3P26045 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN3P26045 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PTPN3P26045 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTPN3P26045 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.86■□□□□ 0.93
PTPN3P26045 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN3P26045 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN3P26045 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN3P26045 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN3P26045 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.85■□□□□ 0.93
PTPN3P26045 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN3P26045 AC016405.3-201ENST00000607710 860 ntBASIC20.85■□□□□ 0.93
PTPN3P26045 BID-214ENST00000617586 542 ntTSL 5 BASIC20.85■□□□□ 0.93
PTPN3P26045 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN3P26045 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN3P26045 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.85■□□□□ 0.93
PTPN3P26045 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PTPN3P26045 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.85■□□□□ 0.93
PTPN3P26045 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.84■□□□□ 0.93
PTPN3P26045 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PTPN3P26045 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 AL162412.1-201ENST00000567129 965 ntBASIC20.84■□□□□ 0.93
PTPN3P26045 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.84■□□□□ 0.93
PTPN3P26045 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.84■□□□□ 0.93
PTPN3P26045 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PTPN3P26045 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PTPN3P26045 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms