Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.84■□□□□ 0.61
THBS1P07996 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
THBS1P07996 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
THBS1P07996 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
THBS1P07996 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.84■□□□□ 0.61
THBS1P07996 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.84■□□□□ 0.61
THBS1P07996 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
THBS1P07996 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
THBS1P07996 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.84■□□□□ 0.61
THBS1P07996 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
THBS1P07996 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
THBS1P07996 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.84■□□□□ 0.61
THBS1P07996 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
THBS1P07996 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
THBS1P07996 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
THBS1P07996 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.83■□□□□ 0.61
THBS1P07996 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
THBS1P07996 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
THBS1P07996 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.83■□□□□ 0.61
THBS1P07996 SLC25A24-204ENST00000569674 2357 ntBASIC18.83■□□□□ 0.61
THBS1P07996 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.83■□□□□ 0.61
THBS1P07996 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
THBS1P07996 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
THBS1P07996 CDV3P1-201ENST00000471403 739 ntBASIC18.83■□□□□ 0.6
THBS1P07996 AC090192.1-201ENST00000517740 490 ntBASIC18.83■□□□□ 0.6
THBS1P07996 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
THBS1P07996 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.83■□□□□ 0.6
THBS1P07996 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.83■□□□□ 0.6
THBS1P07996 NTF6G-201ENST00000591094 616 ntBASIC18.83■□□□□ 0.6
THBS1P07996 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS1P07996 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS1P07996 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS1P07996 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
THBS1P07996 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
THBS1P07996 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
THBS1P07996 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
THBS1P07996 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
THBS1P07996 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
THBS1P07996 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.82■□□□□ 0.6
THBS1P07996 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.82■□□□□ 0.6
THBS1P07996 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
THBS1P07996 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.82■□□□□ 0.6
THBS1P07996 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.82■□□□□ 0.6
THBS1P07996 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
THBS1P07996 AL137784.2-201ENST00000607332 1000 ntBASIC18.82■□□□□ 0.6
THBS1P07996 AL512408.1-201ENST00000569378 2000 ntBASIC18.82■□□□□ 0.6
THBS1P07996 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
THBS1P07996 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
THBS1P07996 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
THBS1P07996 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.81■□□□□ 0.6
THBS1P07996 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.81■□□□□ 0.6
THBS1P07996 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
THBS1P07996 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
THBS1P07996 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.81■□□□□ 0.6
THBS1P07996 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.81■□□□□ 0.6
THBS1P07996 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.81■□□□□ 0.6
THBS1P07996 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.81■□□□□ 0.6
THBS1P07996 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.81■□□□□ 0.6
THBS1P07996 FAM21FP-204ENST00000608637 956 ntBASIC18.81■□□□□ 0.6
THBS1P07996 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.81■□□□□ 0.6
THBS1P07996 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.81■□□□□ 0.6
THBS1P07996 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
THBS1P07996 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
THBS1P07996 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.8■□□□□ 0.6
THBS1P07996 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THBS1P07996 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THBS1P07996 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.8■□□□□ 0.6
THBS1P07996 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms